Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC026333.2-201ENST00000542164 106 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 CYCSP30-201ENST00000546447 172 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC011602.1-201ENST00000546484 331 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC006130.2-201ENST00000586202 326 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC012065.4-201ENST00000602445 679 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 PRELID3BP8-201ENST00000604148 295 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC006077.1-201ENST00000604746 343 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC068276.1-201ENST00000605793 379 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 RN7SKP299-201ENST00000606679 301 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC103710.4-201ENST00000609301 899 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC092140.2-201ENST00000618027 521 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC009878.1-201ENST00000621819 340 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AL357559.1-201ENST00000622228 274 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 AC091925.2-201ENST00000625059 256 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 ZNF826P-207ENST00000622273 1910 ntBASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SLC44A1Q8WWI5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 FGF7P2-201ENST00000332473 296 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 MIR30E-201ENST00000362104 92 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 RNU6-623P-201ENST00000363143 105 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 RNU6-359P-201ENST00000365466 108 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AP002088.1-201ENST00000382740 395 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 Y_RNA.436-201ENST00000384097 102 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 Y_RNA.553-201ENST00000384670 102 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 RN7SKP202-201ENST00000410439 330 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC068533.1-201ENST00000418542 415 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 MTCYBP45-201ENST00000435243 565 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 Z95327.1-201ENST00000446082 482 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AL592447.1-201ENST00000447592 540 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 SNRPFP4-201ENST00000456366 242 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC010401.1-201ENST00000463867 348 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC068724.1-201ENST00000487100 792 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AP001025.2-201ENST00000490908 477 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC078817.1-201ENST00000492623 435 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC034222.1-201ENST00000494052 532 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 COX7A2P2-201ENST00000505291 250 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 SAP18P1-201ENST00000512058 390 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC091965.2-201ENST00000512324 613 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 RNU2-27P-201ENST00000516185 142 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 MED28P5-201ENST00000528254 438 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AP000873.5-201ENST00000533906 236 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC087499.8-201ENST00000578406 226 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 RSL24D1P11-201ENST00000591045 491 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC022146.1-201ENST00000595307 847 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC087752.4-201ENST00000605911 462 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 AC040168.1-201ENST00000623594 991 ntBASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC44A1Q8WWI5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 AL049780.3-201ENST00000624612 1583 ntBASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 PWAR6-201ENST00000552334 4618 ntBASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 Y_RNA.234-201ENST00000364409 97 ntBASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 RNY3P10-201ENST00000384764 102 ntBASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 AL590704.1-201ENST00000402856 794 ntBASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 AL139247.1-201ENST00000422768 325 ntBASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC44A1Q8WWI5 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms