Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC073464.1-201ENST00000429823 534 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 RPL31P35-201ENST00000431058 377 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 EZH2P1-201ENST00000431167 291 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 RPS26P2-201ENST00000440331 348 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL353572.1-201ENST00000442490 417 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL136380.1-201ENST00000447970 162 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 Z99127.3-201ENST00000448158 395 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC079448.1-201ENST00000449377 373 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 FABP3P2-201ENST00000453169 399 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC005008.1-201ENST00000456151 612 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 DEFB109F-201ENST00000491870 277 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 HMGN1P11-201ENST00000508668 303 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 PTGES3P3-201ENST00000511479 482 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 Vault.3-201ENST00000516676 95 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL356432.3-201ENST00000568952 465 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC068790.3-201ENST00000602988 553 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC115621.1-201ENST00000604653 858 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC011816.2-201ENST00000607089 556 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL590282.1-201ENST00000610379 1136 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL133173.2-201ENST00000614270 90 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 U6.42-201ENST00000618440 107 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL359880.1-201ENST00000621879 266 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL732618.1-201ENST00000623251 301 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AC011460.1-201ENST00000636268 1834 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AP004289.2-201ENST00000444413 1457 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 MTND5P33-201ENST00000571250 1450 ntBASIC4.94□□□□□ -1.62
SMC1BQ8NDV3 AL592437.2-201ENST00000421655 2434 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 Y_RNA.372-201ENST00000365599 102 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 SNORA70E-201ENST00000384492 135 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 RPS7P15-201ENST00000415804 584 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AL391219.1-201ENST00000422570 483 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC133104.1-201ENST00000429100 218 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC119618.1-201ENST00000434191 222 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 C1DP4-201ENST00000455429 424 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC104164.2-201ENST00000496953 495 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC010342.1-201ENST00000514047 877 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 RNU6-27P-201ENST00000516146 107 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AP001893.2-201ENST00000526949 202 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 RPL21P7-201ENST00000557463 483 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC060771.1-201ENST00000582031 164 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AL451044.1-201ENST00000604867 238 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 MIR98-201ENST00000606724 119 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC006329.2-201ENST00000611491 394 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC005344.1-201ENST00000613391 459 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AL356321.1-201ENST00000621360 228 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC009268.2-201ENST00000621925 457 ntBASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMC1BQ8NDV3 AC009902.3-201ENST00000606235 2172 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 RNU6-1283P-201ENST00000365314 105 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 SNORD51-201ENST00000384320 80 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 MIR128-1-201ENST00000384921 82 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 SNORD115-47-201ENST00000391226 86 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 Y_RNA.604-201ENST00000410574 102 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AL049734.2-201ENST00000441066 616 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 RBMX2P4-201ENST00000441256 376 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 USP9YP15-201ENST00000442391 422 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AC013267.1-201ENST00000458227 267 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AC146507.1-201ENST00000468335 354 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 RPL31P58-201ENST00000469001 379 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AL121769.1-201ENST00000469473 401 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AC106707.2-201ENST00000484182 374 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AC007182.2-201ENST00000489251 402 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms