Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC009965.2-201ENST00000425328 970 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 MTCO1P20-201ENST00000425366 358 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 ZYG11AP1-201ENST00000430329 837 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC092013.1-201ENST00000438795 332 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC079448.1-201ENST00000449377 373 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AL590365.1-201ENST00000450788 243 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 EIF4A1P11-201ENST00000451239 222 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 RPL26P28-201ENST00000451325 435 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC005726.1-201ENST00000494679 427 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 RN7SKP57-201ENST00000517248 293 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 OR5AL2P-201ENST00000532185 920 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC007458.1-201ENST00000542812 373 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 GNRHR2P1-201ENST00000555315 631 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 AP001429.1-201ENST00000602568 530 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 PRELID3BP8-201ENST00000604148 295 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC055876.5-201ENST00000605667 259 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC087045.1-201ENST00000605856 382 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 RNU6-88P-201ENST00000606801 100 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AC135507.2-201ENST00000612443 309 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AL591424.2-201ENST00000617023 128 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 AL445264.1-201ENST00000621719 171 ntBASIC4.72□□□□□ -1.65
SYNE4Q8N205 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SYNE4Q8N205 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SYNE4Q8N205 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SYNE4Q8N205 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SYNE4Q8N205 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SYNE4Q8N205 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SYNE4Q8N205 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.72□□□□□ -1.65
SYNE4Q8N205 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.72□□□□□ -1.65
SYNE4Q8N205 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
SYNE4Q8N205 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 AC007823.1-201ENST00000569932 1566 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 AC093535.2-201ENST00000624769 2326 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 Y_RNA.25-201ENST00000362528 102 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 RNU6-462P-201ENST00000362659 105 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 RNU6-251P-201ENST00000363235 104 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 RNU6-216P-201ENST00000363282 104 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 RNU6-1279P-201ENST00000383917 103 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 RPL21P111-201ENST00000418453 477 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 AC097713.2-201ENST00000430199 356 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 RPL21P23-201ENST00000446654 460 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 snoU109.1-201ENST00000459339 135 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 AC092757.1-201ENST00000467293 467 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 AC114786.4-201ENST00000508771 728 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 MTND3P22-201ENST00000510932 243 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 RNU6-583P-201ENST00000516012 92 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 RN7SKP289-201ENST00000517244 295 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 MTND1P35-201ENST00000526739 508 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 AP003122.4-201ENST00000530980 758 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 MTND6P33-201ENST00000571794 183 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 MIR4637-201ENST00000582405 84 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 AC008752.3-201ENST00000588113 712 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 AL590282.1-201ENST00000610379 1136 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 AC243312.2-201ENST00000623340 601 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 MTND1P37-201ENST00000636562 264 ntBASIC4.71□□□□□ -1.66
SYNE4Q8N205 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SYNE4Q8N205 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SYNE4Q8N205 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
SYNE4Q8N205 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SYNE4Q8N205 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNE4Q8N205 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNE4Q8N205 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 RNU6-444P-201ENST00000383988 108 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 RNU6-533P-201ENST00000384144 107 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AL356776.1-201ENST00000406574 447 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AMD1P2-201ENST00000412936 992 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AL513174.1-201ENST00000423182 629 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms