Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 MIR4444-2-201ENST00000584390 74 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 SEPT7P9-203ENST00000604116 343 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 OR10AB1P-201ENST00000609613 938 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC104073.3-201ENST00000610942 955 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC009902.3-201ENST00000606235 2172 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC008725.1-201ENST00000605123 2263 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 DEFB108C-201ENST00000400154 252 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 RPL7P25-201ENST00000404151 721 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AL138880.1-201ENST00000405824 642 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 MTCO3P41-201ENST00000414801 328 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AL137014.1-201ENST00000420490 1226 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC099677.1-201ENST00000420575 175 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC069157.1-201ENST00000421749 137 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AL591419.1-201ENST00000427423 339 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AL451062.2-201ENST00000427515 271 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 BX890604.2-201ENST00000427883 474 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AL589823.1-201ENST00000429577 183 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 DLGAP5P1-201ENST00000430307 464 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC011742.1-201ENST00000431448 434 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 Z74696.2-201ENST00000436514 498 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC092641.1-201ENST00000440229 772 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC099563.1-201ENST00000456086 418 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 HMGB3P30-201ENST00000457863 606 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 UBDP1-202ENST00000457888 382 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 RPL7P15-201ENST00000461190 712 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC091153.1-201ENST00000466297 402 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 LARP1BP2-201ENST00000486594 519 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 RPL31P61-201ENST00000496160 376 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC126177.3-201ENST00000551839 688 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 ZNF519P3-201ENST00000557158 1032 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC060771.1-201ENST00000582031 164 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC012669.1-201ENST00000603209 283 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC006254.3-201ENST00000603353 884 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AL139286.2-201ENST00000606838 396 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC092354.2-201ENST00000607786 514 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 NCAPGP1-201ENST00000505112 1814 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 ZNF285B-201ENST00000561698 1767 ntBASIC3.55□□□□□ -1.84
BEST3Q8N1M1 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BEST3Q8N1M1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 MIR423-201ENST00000362201 94 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 RNU6-1119P-201ENST00000384349 108 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 Y_RNA.548-201ENST00000384656 105 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 BEND7P1-201ENST00000422058 457 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 ATP5HP2-201ENST00000433885 485 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 USP9YP7-201ENST00000436723 430 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 HMGN2P21-201ENST00000447764 270 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AL358232.1-201ENST00000448030 501 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 USP9YP32-201ENST00000452432 430 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AL645939.1-201ENST00000453429 797 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 S100A11P1-201ENST00000477525 312 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 RPL23AP41-201ENST00000484754 458 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AC106872.2-201ENST00000494303 480 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.54□□□□□ -1.84
BEST3Q8N1M1 Vault.1-201ENST00000516474 102 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 RNU6-528P-201ENST00000516926 100 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 AC103783.1-201ENST00000520506 373 ntBASIC3.54□□□□□ -1.84
BEST3Q8N1M1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms