Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL512598.1-201ENST00000610158 273 ntBASIC1.12□□□□□ -2.23
VPS13BQ7Z7G8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 ZNF876P-202ENST00000398732 1485 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 HMGB1P27-201ENST00000431429 603 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 USP9YP7-201ENST00000436723 430 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 USP9YP32-201ENST00000452432 430 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 RPS15AP17-201ENST00000470598 390 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AC068339.2-201ENST00000534395 618 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 MIR4452-201ENST00000583004 71 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AL356280.1-201ENST00000603614 379 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 OR1S1-201ENST00000624470 978 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 RNY1-201ENST00000364228 113 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 POLHP1-201ENST00000411806 470 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 RPL7P46-201ENST00000425129 740 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AC135721.1-201ENST00000497954 479 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AC090071.1-201ENST00000507713 644 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 LTV1P1-201ENST00000510683 1237 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 RNA5SP181-201ENST00000410246 98 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 ARF4P2-201ENST00000430209 526 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AL121594.1-201ENST00000475906 575 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AC087241.2-201ENST00000535801 324 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 CD24P2-201ENST00000565486 219 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 AC099778.2-201ENST00000610904 211 ntBASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
VPS13BQ7Z7G8 CKAP2P1-201ENST00000555477 2049 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AC093536.2-201ENST00000565257 1406 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 TAS2R15P-201ENST00000390674 928 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 RPL23AP55-201ENST00000498163 452 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 RNU6-1334P-201ENST00000516032 105 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 PTP4A1P6-201ENST00000531034 478 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AL121972.1-201ENST00000402023 252 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 POLR2J4-204ENST00000418424 324 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AC022431.1-201ENST00000450941 438 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 PTGES3P5-201ENST00000455109 434 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 RNU1-123P-201ENST00000458950 160 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AC087441.2-201ENST00000529141 262 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AC011604.1-201ENST00000545978 196 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AL645939.4-201ENST00000604495 135 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AP000553.5-201ENST00000641933 54 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AC023128.2-201ENST00000420880 1223 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 CDC42P1-201ENST00000456658 548 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 PPP1R2P5-201ENST00000457256 603 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 SNRPGP3-201ENST00000469405 227 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AC140059.1-201ENST00000489238 361 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AC010265.1-201ENST00000513509 211 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 COX6CP5-201ENST00000527162 228 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 MIR4506-201ENST00000584693 77 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 AL159169.2-201ENST00000610061 1269 ntBASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13BQ7Z7G8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
VPS13BQ7Z7G8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
VPS13BQ7Z7G8 AL353746.1-201ENST00000566293 6881 ntBASIC1.09□□□□□ -2.23
VPS13BQ7Z7G8 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.09□□□□□ -2.23
VPS13BQ7Z7G8 RNU6-1320P-201ENST00000390838 107 ntBASIC1.09□□□□□ -2.23
VPS13BQ7Z7G8 RNU6-1269P-201ENST00000391139 107 ntBASIC1.09□□□□□ -2.23
VPS13BQ7Z7G8 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.09□□□□□ -2.23
VPS13BQ7Z7G8 TRIAP1P1-201ENST00000427062 225 ntBASIC1.09□□□□□ -2.23
VPS13BQ7Z7G8 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.09□□□□□ -2.23
VPS13BQ7Z7G8 RNU6-599P-201ENST00000459383 107 ntBASIC1.09□□□□□ -2.23
VPS13BQ7Z7G8 RNU6-1193P-201ENST00000459461 107 ntBASIC1.09□□□□□ -2.23
VPS13BQ7Z7G8 OR8X1P-201ENST00000534542 869 ntBASIC1.09□□□□□ -2.23
VPS13BQ7Z7G8 RPS3AP23-202ENST00000574601 686 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms