Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 NDUFA5P7-201ENST00000452914 242 ntBASIC3.8□□□□□ -1.8
NPHP3Q7Z494 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 SYPL1P1-201ENST00000473622 768 ntBASIC3.8□□□□□ -1.8
NPHP3Q7Z494 AC069528.1-202ENST00000482888 637 ntBASIC3.8□□□□□ -1.8
NPHP3Q7Z494 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 KCTD9P5-201ENST00000504141 1170 ntBASIC3.8□□□□□ -1.8
NPHP3Q7Z494 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 RNU6-885P-201ENST00000516607 104 ntBASIC3.8□□□□□ -1.8
NPHP3Q7Z494 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 AC007954.1-201ENST00000554198 494 ntBASIC3.8□□□□□ -1.8
NPHP3Q7Z494 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 VN1R83P-201ENST00000595685 445 ntBASIC3.8□□□□□ -1.8
NPHP3Q7Z494 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 AL450336.1-201ENST00000605180 586 ntBASIC3.8□□□□□ -1.8
NPHP3Q7Z494 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 AC109454.4-201ENST00000623411 649 ntBASIC3.8□□□□□ -1.8
NPHP3Q7Z494 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPHP3Q7Z494 AC117529.2-201ENST00000512159 2068 ntBASIC3.8□□□□□ -1.8
NPHP3Q7Z494 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 MIR217-201ENST00000384817 110 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 TMSB4XP8-201ENST00000402089 135 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 TMSB4XP6-201ENST00000415187 135 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 RPL32P35-201ENST00000415214 394 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 EI24P1-201ENST00000416584 867 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 MTND2P16-201ENST00000419987 799 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 TMSB4XP1-201ENST00000424567 135 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 MTND2P5-201ENST00000432656 1006 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 WASF1P1-201ENST00000447560 1131 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 AL589880.1-201ENST00000448271 287 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 AC079776.3-201ENST00000450665 370 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 AC096725.1-201ENST00000514266 313 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 FAM60DP-201ENST00000524174 632 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 AP003122.3-201ENST00000526316 255 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 AC098826.3-201ENST00000603823 466 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 AC006386.1-201ENST00000619436 415 ntBASIC3.79□□□□□ -1.8
NPHP3Q7Z494 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.79□□□□□ -1.8
NPHP3Q7Z494 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 SNORA31-201ENST00000362607 130 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 RNU6-582P-201ENST00000362989 107 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 RNVU1-3-201ENST00000364313 161 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 snoZ40.1-201ENST00000364540 72 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 RNU6-335P-201ENST00000364563 113 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 SNORD116-23-201ENST00000384645 92 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 SNORA40.2-201ENST00000390847 128 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AL592310.1-201ENST00000414330 671 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 RPL23AP44-201ENST00000482216 473 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AC109329.2-201ENST00000519658 482 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 MTCYBP41-201ENST00000528913 1123 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 MTND1P24-201ENST00000552175 861 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AC023813.2-201ENST00000564321 469 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AP003973.1-201ENST00000604639 691 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AC068787.1-201ENST00000623908 691 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 MIR4278-201ENST00000636094 69 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 LINC02211-204ENST00000642024 1070 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPHP3Q7Z494 AL021368.2-201ENST00000606125 5352 ntBASIC3.78□□□□□ -1.8
NPHP3Q7Z494 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 GABPAP-201ENST00000419271 1356 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 MIR148B-201ENST00000362252 99 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms