Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.75□□□□□ -1.49
USPL1Q5W0Q7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.75□□□□□ -1.49
USPL1Q5W0Q7 AC110743.1-201ENST00000584870 478 ntBASIC5.75□□□□□ -1.49
USPL1Q5W0Q7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.75□□□□□ -1.49
USPL1Q5W0Q7 AP001486.3-201ENST00000615334 372 ntBASIC5.75□□□□□ -1.49
USPL1Q5W0Q7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.75□□□□□ -1.49
USPL1Q5W0Q7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
USPL1Q5W0Q7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
USPL1Q5W0Q7 AL121839.2-201ENST00000565058 6943 ntBASIC5.75□□□□□ -1.49
USPL1Q5W0Q7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 AC083843.2-201ENST00000568248 6253 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 AL391684.1-202ENST00000641293 1636 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 RNU6-552P-201ENST00000362869 119 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 RNU6-511P-201ENST00000363496 107 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 RN7SKP224-201ENST00000364140 325 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 RNU6-1297P-201ENST00000384415 104 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 MIR23A-201ENST00000385245 73 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 RNU6-903P-201ENST00000391270 109 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 AL445189.1-201ENST00000405722 338 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 AL606923.1-201ENST00000406616 190 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 RNU2-39P-201ENST00000410604 198 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 MTATP6P16-201ENST00000434543 526 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 MRPL48P1-201ENST00000445390 636 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 AL353691.1-201ENST00000451332 387 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 PARP4P3-201ENST00000510265 317 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 SNORA25.17-201ENST00000517184 124 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 AP000857.1-201ENST00000532151 543 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 MIR4429-201ENST00000580105 73 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 MIR3671-201ENST00000580455 88 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 RN7SL435P-201ENST00000584418 282 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 MIR492-201ENST00000638676 116 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 AP004289.2-201ENST00000444413 1457 ntBASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
USPL1Q5W0Q7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AC005332.5-201ENST00000591222 2919 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 OR5P1P-201ENST00000299512 925 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 Y_RNA.202-201ENST00000364083 110 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 RNU6-43P-201ENST00000384302 107 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 MIR559-201ENST00000385188 96 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AL022722.2-201ENST00000402519 180 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AL359643.1-201ENST00000404109 423 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AP000580.1-201ENST00000404439 358 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 E2F6P2-201ENST00000420708 748 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AC127537.2-201ENST00000439258 465 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 ISCUP1-201ENST00000454451 448 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AC079804.1-201ENST00000461922 436 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 RPL7P42-201ENST00000481005 679 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 RN7SL604P-201ENST00000492589 296 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AC068305.1-201ENST00000497406 726 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 TTC39CP1-201ENST00000512513 755 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 RPL7P20-201ENST00000520308 745 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 OR8R1P-201ENST00000543943 764 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AC128657.1-201ENST00000549459 145 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 MIR3171-201ENST00000584270 74 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 MIR4424-201ENST00000585257 86 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AC006130.2-201ENST00000586202 326 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AC007566.2-201ENST00000603642 413 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AL590099.1-201ENST00000615276 138 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 MAPK10-304ENST00000641341 3984 ntBASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
USPL1Q5W0Q7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC022893.2-201ENST00000564832 3296 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 SPRR2C-201ENST00000290702 219 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 RNU6-522P-201ENST00000364497 107 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 RNU6-641P-201ENST00000384006 107 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms