Protein–RNA interactions for Protein: Q15459

SF3A1, Splicing factor 3A subunit 1, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1Q15459 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.16□□□□□ -1.58
SF3A1Q15459 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.16□□□□□ -1.58
SF3A1Q15459 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.16□□□□□ -1.58
SF3A1Q15459 AL355836.1-201ENST00000555951 870 ntBASIC5.16□□□□□ -1.58
SF3A1Q15459 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.16□□□□□ -1.58
SF3A1Q15459 AC005951.2-201ENST00000576282 495 ntBASIC5.16□□□□□ -1.58
SF3A1Q15459 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.16□□□□□ -1.58
SF3A1Q15459 BPIFA4P-203ENST00000603168 689 ntBASIC5.16□□□□□ -1.58
SF3A1Q15459 AP002360.4-201ENST00000606980 481 ntBASIC5.16□□□□□ -1.58
SF3A1Q15459 AP002826.1-201ENST00000608835 315 ntBASIC5.16□□□□□ -1.58
SF3A1Q15459 AC004696.1-201ENST00000614345 607 ntBASIC5.16□□□□□ -1.58
SF3A1Q15459 AC090517.2-201ENST00000614966 680 ntBASIC5.16□□□□□ -1.58
SF3A1Q15459 AL589994.2-201ENST00000621124 579 ntBASIC5.16□□□□□ -1.58
SF3A1Q15459 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.16□□□□□ -1.58
SF3A1Q15459 CPHL1P-201ENST00000461341 3407 ntBASIC5.16□□□□□ -1.58
SF3A1Q15459 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SF3A1Q15459 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SF3A1Q15459 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SF3A1Q15459 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SF3A1Q15459 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
SF3A1Q15459 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SF3A1Q15459 DEFB108F-201ENST00000344638 222 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 RNU6-1085P-201ENST00000363576 107 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 Y_RNA.159-201ENST00000363674 87 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 RNA5SP22-201ENST00000365393 109 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 SNORA36C-201ENST00000384289 132 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 RNU2-71P-201ENST00000411395 189 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 RAB28P1-201ENST00000411517 641 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.15□□□□□ -1.59
SF3A1Q15459 RPS20P5-201ENST00000434808 360 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.15□□□□□ -1.59
SF3A1Q15459 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.15□□□□□ -1.59
SF3A1Q15459 AC012671.1-201ENST00000451912 203 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 RAD23BP3-201ENST00000454157 1152 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 RPS29P33-201ENST00000456717 146 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.15□□□□□ -1.59
SF3A1Q15459 FTH1P2-201ENST00000466086 412 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 RPL12P20-201ENST00000475538 479 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AC106872.2-201ENST00000494303 480 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SF3A1Q15459 AC026427.2-201ENST00000506228 536 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 SNORA31.8-201ENST00000516327 108 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 RNU6-1092P-201ENST00000516955 87 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AP003072.2-201ENST00000527756 676 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.15□□□□□ -1.59
SF3A1Q15459 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.15□□□□□ -1.59
SF3A1Q15459 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.15□□□□□ -1.59
SF3A1Q15459 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.15□□□□□ -1.59
SF3A1Q15459 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.15□□□□□ -1.59
SF3A1Q15459 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.15□□□□□ -1.59
SF3A1Q15459 AL670379.6-201ENST00000603753 252 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AL670379.11-201ENST00000604059 253 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AC008162.1-201ENST00000604718 254 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AL670379.1-201ENST00000604752 252 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AL670379.5-201ENST00000605253 252 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AL670379.12-201ENST00000605291 253 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AL670379.8-201ENST00000605353 252 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AL670379.7-201ENST00000605823 252 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AL121992.2-201ENST00000606262 256 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.15□□□□□ -1.59
SF3A1Q15459 AL138721.1-201ENST00000616756 179 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 AL713922.2-201ENST00000619384 716 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SF3A1Q15459 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SF3A1Q15459 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
SF3A1Q15459 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SF3A1Q15459 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SF3A1Q15459 EXOC5P1-201ENST00000510543 1969 ntBASIC5.15□□□□□ -1.59
SF3A1Q15459 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SF3A1Q15459 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.14□□□□□ -1.59
SF3A1Q15459 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SF3A1Q15459 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SF3A1Q15459 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.14□□□□□ -1.59
SF3A1Q15459 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.14□□□□□ -1.59
SF3A1Q15459 XIAPP3-201ENST00000312918 795 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 AC073343.1-201ENST00000328239 651 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 RNU6-188P-201ENST00000364207 107 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 RNU5E-6P-201ENST00000365574 115 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SF3A1Q15459 RNU6-780P-201ENST00000391030 104 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 NDUFS5P1-201ENST00000405668 289 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 BTF3P7-201ENST00000407097 488 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 RNU2-39P-201ENST00000410604 198 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 RN7SKP106-201ENST00000410832 272 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.14□□□□□ -1.59
SF3A1Q15459 MTCYBP5-201ENST00000423752 1135 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 AC093106.2-201ENST00000428212 385 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.14□□□□□ -1.59
SF3A1Q15459 BNIP3P2-201ENST00000441221 577 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 GAPDHP27-201ENST00000447427 1020 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 FGF7P3-201ENST00000454645 303 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 VWA8P1-201ENST00000510889 176 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.14□□□□□ -1.59
SF3A1Q15459 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.14□□□□□ -1.59
SF3A1Q15459 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.14□□□□□ -1.59
SF3A1Q15459 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.14□□□□□ -1.59
SF3A1Q15459 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.14□□□□□ -1.59
SF3A1Q15459 RPL23AP84-201ENST00000571193 464 ntBASIC5.14□□□□□ -1.59
SF3A1Q15459 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.14□□□□□ -1.59
SF3A1Q15459 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms