Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SSXP10-201ENST00000402595 565 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 U3.40-201ENST00000408706 208 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 AC096664.2-201ENST00000411843 406 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 AC099677.1-201ENST00000420575 175 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 FNDC3CP-201ENST00000420795 1155 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 MTCO3P30-201ENST00000426425 670 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 AC063976.3-201ENST00000426849 329 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 UBE2V1P13-201ENST00000436983 439 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 RPL7P29-201ENST00000437151 728 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 AL606490.8-201ENST00000441624 319 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 AC009296.1-201ENST00000443146 155 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 AC090255.1-201ENST00000495779 349 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 OR5H5P-201ENST00000503164 928 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 SETP12-201ENST00000514068 805 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 SNORA31.18-201ENST00000517043 134 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 COX6CP5-201ENST00000527162 228 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 RPS3AP23-202ENST00000574601 686 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 LARP7P3-201ENST00000579888 337 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 AC017100.2-201ENST00000584628 355 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 AC244517.1-201ENST00000606030 2086 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 AL513185.3-201ENST00000433335 1300 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 CKAP2P1-201ENST00000555477 2049 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 ZNF720P1-201ENST00000562403 1939 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
HIST1H1AQ02539 SNORA68.1-201ENST00000364537 132 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 RNA5SP37-201ENST00000365420 130 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 SNORA11.1-201ENST00000408133 129 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.84□□□□□ -2.11
HIST1H1AQ02539 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.84□□□□□ -2.11
HIST1H1AQ02539 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.84□□□□□ -2.11
HIST1H1AQ02539 AC019097.1-201ENST00000424783 735 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 AL365496.1-201ENST00000426885 215 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 EZH2P1-201ENST00000431167 291 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.84□□□□□ -2.11
HIST1H1AQ02539 AC097462.2-201ENST00000504623 481 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HIST1H1AQ02539 RN7SKP24-201ENST00000515888 284 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 BTF3P12-201ENST00000519620 469 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 AP003467.2-201ENST00000520175 319 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.84□□□□□ -2.11
HIST1H1AQ02539 MIR3200-201ENST00000580767 85 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 AC005000.2-201ENST00000605468 310 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.84□□□□□ -2.11
HIST1H1AQ02539 UCA1.1-201ENST00000620952 75 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 AC012640.5-201ENST00000623897 319 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 BX649567.1-201ENST00000642071 1134 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 ZNF658B-202ENST00000615961 3375 ntBASIC1.84□□□□□ -2.11
HIST1H1AQ02539 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 RNU1-51P-201ENST00000365345 176 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 RNU6-198P-201ENST00000384258 104 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 MIR27B-201ENST00000385129 97 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 HMGN2P38-201ENST00000423806 265 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 YWHAZP8-201ENST00000436935 731 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 OR6K5P-201ENST00000447050 945 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 AC112673.1-201ENST00000513168 575 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 OR5AK3P-201ENST00000527486 1297 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 AC139103.1-201ENST00000534696 1030 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 GLYCAM1-201ENST00000546596 285 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 AC025281.1-201ENST00000567026 265 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 MIR4319-201ENST00000577285 85 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 AC013468.1-201ENST00000608680 598 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 AC104446.1-201ENST00000613728 1321 ntBASIC1.83□□□□□ -2.12
HIST1H1AQ02539 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.83□□□□□ -2.12
HIST1H1AQ02539 MTND4P1-201ENST00000457501 1466 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 RNU6-989P-201ENST00000362756 107 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 RNU6-1074P-201ENST00000383995 104 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms