Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.22□□□□□ -1.89
CX3CL1P78423 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.22□□□□□ -1.89
CX3CL1P78423 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.22□□□□□ -1.89
CX3CL1P78423 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.22□□□□□ -1.89
CX3CL1P78423 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.22□□□□□ -1.89
CX3CL1P78423 AC244505.7-201ENST00000599675 272 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 AC011468.4-201ENST00000603942 409 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 AC121334.2-201ENST00000605387 271 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 AC004067.1-201ENST00000608733 700 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CL1P78423 AC011939.3-201ENST00000613686 466 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 AC108479.2-201ENST00000617314 601 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.22□□□□□ -1.89
CX3CL1P78423 AC019226.1-201ENST00000625666 515 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.22□□□□□ -1.89
CX3CL1P78423 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CX3CL1P78423 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
CX3CL1P78423 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CL1P78423 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.21□□□□□ -1.9
CX3CL1P78423 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CL1P78423 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CX3CL1P78423 Y_RNA.359-201ENST00000365498 102 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CL1P78423 RNU6-348P-201ENST00000384386 107 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 MIR1251-201ENST00000408552 70 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 RNU2-71P-201ENST00000411395 189 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 HMGN1P24-201ENST00000412282 298 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 CDK8P2-201ENST00000415020 547 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.21□□□□□ -1.9
CX3CL1P78423 OR5BE1P-201ENST00000425977 939 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.21□□□□□ -1.9
CX3CL1P78423 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.21□□□□□ -1.9
CX3CL1P78423 RPL26P6-201ENST00000440913 438 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.21□□□□□ -1.9
CX3CL1P78423 MTND1P27-201ENST00000451117 902 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 RNU7-59P-201ENST00000459101 61 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 RN7SL93P-201ENST00000463035 293 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 RPS7P7-201ENST00000463499 571 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 RPL7P19-201ENST00000469948 618 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.21□□□□□ -1.9
CX3CL1P78423 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.21□□□□□ -1.9
CX3CL1P78423 AC108860.1-201ENST00000484521 383 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CL1P78423 AC114967.1-201ENST00000504890 259 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 BTF3L4P4-201ENST00000506381 449 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CX3CL1P78423 MTCO3P7-201ENST00000510008 774 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CL1P78423 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.21□□□□□ -1.9
CX3CL1P78423 SNORA31.22-201ENST00000517204 135 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 AC107934.1-201ENST00000522215 217 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.21□□□□□ -1.9
CX3CL1P78423 AP002963.1-201ENST00000530590 184 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.21□□□□□ -1.9
CX3CL1P78423 MED28P6-201ENST00000558776 231 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.21□□□□□ -1.9
CX3CL1P78423 MIR3146-201ENST00000580367 79 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CL1P78423 AL451086.1-201ENST00000605596 223 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 BX664608.1-201ENST00000610519 487 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 AC024941.1-201ENST00000612250 334 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 AC083809.1-201ENST00000615051 472 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 AL603758.1-201ENST00000618654 241 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CL1P78423 AC091953.2-201ENST00000623979 160 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.21□□□□□ -1.9
CX3CL1P78423 OR5BE1P-202ENST00000641168 1176 ntBASIC3.21□□□□□ -1.9
CX3CL1P78423 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CX3CL1P78423 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CL1P78423 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CL1P78423 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.21□□□□□ -1.9
CX3CL1P78423 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CX3CL1P78423 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CL1P78423 RPS4XP5-202ENST00000449995 1334 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CL1P78423 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
CX3CL1P78423 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CL1P78423 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.2□□□□□ -1.9
CX3CL1P78423 Y_RNA.194-201ENST00000363985 102 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 RNA5SP130-201ENST00000364431 114 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 RNY4P16-201ENST00000364768 94 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.2□□□□□ -1.9
CX3CL1P78423 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CX3CL1P78423 RNU6-76P-201ENST00000384060 104 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 DEFB108C-201ENST00000400154 252 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AL022722.2-201ENST00000402519 180 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 HSPE1P26-201ENST00000405341 275 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 RNU2-37P-201ENST00000410695 177 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.2□□□□□ -1.9
CX3CL1P78423 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.2□□□□□ -1.9
CX3CL1P78423 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CL1P78423 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.2□□□□□ -1.9
CX3CL1P78423 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.2□□□□□ -1.9
CX3CL1P78423 TIMM9P1-201ENST00000436122 256 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CL1P78423 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.2□□□□□ -1.9
CX3CL1P78423 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CL1P78423 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.2□□□□□ -1.9
CX3CL1P78423 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CL1P78423 AL162389.1-201ENST00000449233 177 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms