Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.89□□□□□ -1.79
RAE1P78406 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.89□□□□□ -1.79
RAE1P78406 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.89□□□□□ -1.79
RAE1P78406 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.89□□□□□ -1.79
RAE1P78406 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.89□□□□□ -1.79
RAE1P78406 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.89□□□□□ -1.79
RAE1P78406 AP001330.5-201ENST00000607176 411 ntBASIC3.89□□□□□ -1.79
RAE1P78406 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.89□□□□□ -1.79
RAE1P78406 BX323046.1-201ENST00000610145 535 ntBASIC3.89□□□□□ -1.79
RAE1P78406 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.89□□□□□ -1.79
RAE1P78406 U6.42-201ENST00000618440 107 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AC233309.1-201ENST00000619522 751 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AC139792.3-201ENST00000623525 224 ntBASIC3.89□□□□□ -1.79
RAE1P78406 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.89□□□□□ -1.79
RAE1P78406 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RAE1P78406 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
RAE1P78406 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RAE1P78406 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
RAE1P78406 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RAE1P78406 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.89□□□□□ -1.79
RAE1P78406 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RAE1P78406 AC138915.3-201ENST00000562908 1389 ntBASIC3.89□□□□□ -1.79
RAE1P78406 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RAE1P78406 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RAE1P78406 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RAE1P78406 MIR383-201ENST00000362257 73 ntBASIC3.88□□□□□ -1.79
RAE1P78406 RNY3P13-201ENST00000365542 102 ntBASIC3.88□□□□□ -1.79
RAE1P78406 RNU1-39P-201ENST00000383897 165 ntBASIC3.88□□□□□ -1.79
RAE1P78406 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RAE1P78406 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.88□□□□□ -1.79
RAE1P78406 CCDC58P2-201ENST00000417131 366 ntBASIC3.88□□□□□ -1.79
RAE1P78406 MTATP6P18-201ENST00000417994 673 ntBASIC3.88□□□□□ -1.79
RAE1P78406 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.88□□□□□ -1.79
RAE1P78406 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.88□□□□□ -1.79
RAE1P78406 ELOCP14-201ENST00000428070 331 ntBASIC3.88□□□□□ -1.79
RAE1P78406 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.88□□□□□ -1.79
RAE1P78406 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.88□□□□□ -1.79
RAE1P78406 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.88□□□□□ -1.79
RAE1P78406 GPR143P-201ENST00000434155 205 ntBASIC3.88□□□□□ -1.79
RAE1P78406 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.88□□□□□ -1.79
RAE1P78406 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.88□□□□□ -1.79
RAE1P78406 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.88□□□□□ -1.79
RAE1P78406 RPL35AP22-201ENST00000436855 335 ntBASIC3.88□□□□□ -1.79
RAE1P78406 ELOCP7-201ENST00000439968 331 ntBASIC3.88□□□□□ -1.79
RAE1P78406 WASF1P1-201ENST00000447560 1131 ntBASIC3.88□□□□□ -1.79
RAE1P78406 RPL23AP20-201ENST00000447965 421 ntBASIC3.88□□□□□ -1.79
RAE1P78406 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.88□□□□□ -1.79
RAE1P78406 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.88□□□□□ -1.79
RAE1P78406 RPS26P15-201ENST00000488067 348 ntBASIC3.88□□□□□ -1.79
RAE1P78406 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RAE1P78406 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.88□□□□□ -1.79
RAE1P78406 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.88□□□□□ -1.79
RAE1P78406 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.88□□□□□ -1.79
RAE1P78406 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.88□□□□□ -1.79
RAE1P78406 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.88□□□□□ -1.79
RAE1P78406 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.88□□□□□ -1.79
RAE1P78406 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.88□□□□□ -1.79
RAE1P78406 AC090572.1-201ENST00000519251 160 ntBASIC3.88□□□□□ -1.79
RAE1P78406 AC009643.1-201ENST00000532030 391 ntBASIC3.88□□□□□ -1.79
RAE1P78406 AL133271.1-201ENST00000538229 291 ntBASIC3.88□□□□□ -1.79
RAE1P78406 AL133153.1-201ENST00000557756 303 ntBASIC3.88□□□□□ -1.79
RAE1P78406 AC022968.1-201ENST00000567372 442 ntBASIC3.88□□□□□ -1.79
RAE1P78406 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.88□□□□□ -1.79
RAE1P78406 RN7SL600P-201ENST00000581811 299 ntBASIC3.88□□□□□ -1.79
RAE1P78406 MIR5684-201ENST00000585074 65 ntBASIC3.88□□□□□ -1.79
RAE1P78406 BNIP3P33-201ENST00000598912 569 ntBASIC3.88□□□□□ -1.79
RAE1P78406 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.88□□□□□ -1.79
RAE1P78406 AL136363.1-201ENST00000605349 337 ntBASIC3.88□□□□□ -1.79
RAE1P78406 TUG1_1.1-201ENST00000610654 145 ntBASIC3.88□□□□□ -1.79
RAE1P78406 AL355073.2-201ENST00000612106 557 ntBASIC3.88□□□□□ -1.79
RAE1P78406 AC006338.1-201ENST00000618453 749 ntBASIC3.88□□□□□ -1.79
RAE1P78406 AC009161.2-201ENST00000624626 138 ntBASIC3.88□□□□□ -1.79
RAE1P78406 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.88□□□□□ -1.79
RAE1P78406 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RAE1P78406 MTCO1P9-201ENST00000505577 1534 ntBASIC3.88□□□□□ -1.79
RAE1P78406 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.88□□□□□ -1.79
RAE1P78406 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RAE1P78406 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
RAE1P78406 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RAE1P78406 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RAE1P78406 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RAE1P78406 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RAE1P78406 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RAE1P78406 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
RAE1P78406 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.87□□□□□ -1.79
RAE1P78406 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RAE1P78406 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RAE1P78406 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RAE1P78406 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RAE1P78406 OR1S2-201ENST00000302592 978 ntBASIC3.87□□□□□ -1.79
RAE1P78406 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RAE1P78406 RNU6-1249P-201ENST00000363237 111 ntBASIC3.87□□□□□ -1.79
RAE1P78406 RNU6-1155P-201ENST00000363554 107 ntBASIC3.87□□□□□ -1.79
RAE1P78406 RNU6-1097P-201ENST00000363586 107 ntBASIC3.87□□□□□ -1.79
RAE1P78406 Y_RNA.409-201ENST00000383990 98 ntBASIC3.87□□□□□ -1.79
RAE1P78406 Y_RNA.453-201ENST00000384223 109 ntBASIC3.87□□□□□ -1.79
RAE1P78406 Y_RNA.481-201ENST00000384373 102 ntBASIC3.87□□□□□ -1.79
RAE1P78406 AL603766.1-201ENST00000407763 664 ntBASIC3.87□□□□□ -1.79
RAE1P78406 JKAMPP1-201ENST00000413804 919 ntBASIC3.87□□□□□ -1.79
RAE1P78406 RPS7P15-201ENST00000415804 584 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms