Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDX1P47902 AC008568.2-201ENST00000623862 2313 ntBASIC3.16□□□□□ -1.9
CDX1P47902 MTND5P33-201ENST00000571250 1450 ntBASIC3.16□□□□□ -1.9
CDX1P47902 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDX1P47902 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDX1P47902 UBE3AP2-201ENST00000429033 2259 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC090740.1-201ENST00000623193 2262 ntBASIC3.16□□□□□ -1.9
CDX1P47902 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDX1P47902 MIR372-201ENST00000362225 67 ntBASIC3.16□□□□□ -1.9
CDX1P47902 RNU6-501P-201ENST00000364072 100 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDX1P47902 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.16□□□□□ -1.9
CDX1P47902 AL445189.1-201ENST00000405722 338 ntBASIC3.16□□□□□ -1.9
CDX1P47902 FAT1P1-201ENST00000406588 507 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC017079.2-201ENST00000416102 485 ntBASIC3.16□□□□□ -1.9
CDX1P47902 RPS27AP14-201ENST00000422868 454 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC018630.2-202ENST00000422992 927 ntBASIC3.16□□□□□ -1.9
CDX1P47902 TMEM167AP1-201ENST00000423409 219 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AL365203.2-201ENST00000423444 196 ntBASIC3.16□□□□□ -1.9
CDX1P47902 OR5BE1P-201ENST00000425977 939 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC008850.1-201ENST00000427546 362 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.16□□□□□ -1.9
CDX1P47902 CETN4P-201ENST00000432407 469 ntBASIC3.16□□□□□ -1.9
CDX1P47902 TPT1P14-201ENST00000448018 505 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.16□□□□□ -1.9
CDX1P47902 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.16□□□□□ -1.9
CDX1P47902 MTCO2P6-201ENST00000463134 685 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC092754.2-201ENST00000463506 460 ntBASIC3.16□□□□□ -1.9
CDX1P47902 RPS27AP1-201ENST00000475545 471 ntBASIC3.16□□□□□ -1.9
CDX1P47902 RPL30P6-201ENST00000475925 342 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AL049874.1-201ENST00000489560 388 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC135721.1-201ENST00000497954 479 ntBASIC3.16□□□□□ -1.9
CDX1P47902 RPF2P2-201ENST00000504693 896 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.16□□□□□ -1.9
CDX1P47902 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.16□□□□□ -1.9
CDX1P47902 MTND1P22-201ENST00000510572 951 ntBASIC3.16□□□□□ -1.9
CDX1P47902 RNU6-759P-201ENST00000516740 103 ntBASIC3.16□□□□□ -1.9
CDX1P47902 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.16□□□□□ -1.9
CDX1P47902 AC091516.1-201ENST00000549191 703 ntBASIC3.16□□□□□ -1.9
CDX1P47902 CCNG2P1-201ENST00000549521 1000 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC025627.2-201ENST00000576220 160 ntBASIC3.16□□□□□ -1.9
CDX1P47902 ZNF415P1-201ENST00000582279 1166 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC012417.1-201ENST00000582307 1039 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC068790.3-201ENST00000602988 553 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC104662.1-201ENST00000604448 511 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC008147.4-201ENST00000617570 1204 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AL603758.1-201ENST00000618654 241 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AL603755.1-201ENST00000619504 163 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AF246928.1-201ENST00000623768 87 ntBASIC3.16□□□□□ -1.9
CDX1P47902 AC127502.3-201ENST00000636170 1206 ntBASIC3.16□□□□□ -1.9
CDX1P47902 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.16□□□□□ -1.9
CDX1P47902 OR5BE1P-202ENST00000641168 1176 ntBASIC3.16□□□□□ -1.9
CDX1P47902 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CDX1P47902 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDX1P47902 AL136164.4-201ENST00000625013 2135 ntBASIC3.16□□□□□ -1.9
CDX1P47902 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDX1P47902 CUL1P1-201ENST00000509510 2425 ntBASIC3.15□□□□□ -1.9
CDX1P47902 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.15□□□□□ -1.9
CDX1P47902 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.15□□□□□ -1.9
CDX1P47902 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDX1P47902 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDX1P47902 RNY4P24-201ENST00000362735 96 ntBASIC3.15□□□□□ -1.91
CDX1P47902 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.15□□□□□ -1.91
CDX1P47902 SKINT1L-201ENST00000401057 817 ntBASIC3.15□□□□□ -1.91
CDX1P47902 AL391417.1-201ENST00000404100 426 ntBASIC3.15□□□□□ -1.91
CDX1P47902 CCNG1P1-201ENST00000406783 885 ntBASIC3.15□□□□□ -1.91
CDX1P47902 HSPE1P8-201ENST00000406997 288 ntBASIC3.15□□□□□ -1.91
CDX1P47902 RNU6-920P-201ENST00000410926 92 ntBASIC3.15□□□□□ -1.91
CDX1P47902 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX1P47902 AC107081.1-201ENST00000414975 361 ntBASIC3.15□□□□□ -1.91
CDX1P47902 UBE2FP1-201ENST00000416536 447 ntBASIC3.15□□□□□ -1.91
CDX1P47902 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.15□□□□□ -1.91
CDX1P47902 AL512649.1-201ENST00000428997 581 ntBASIC3.15□□□□□ -1.91
CDX1P47902 AL356867.1-201ENST00000429623 299 ntBASIC3.15□□□□□ -1.91
CDX1P47902 AL512286.1-201ENST00000439244 400 ntBASIC3.15□□□□□ -1.91
CDX1P47902 RPS4XP4-201ENST00000443195 763 ntBASIC3.15□□□□□ -1.91
CDX1P47902 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX1P47902 ZNF114P1-201ENST00000453500 292 ntBASIC3.15□□□□□ -1.91
CDX1P47902 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX1P47902 MTCO1P42-201ENST00000457379 726 ntBASIC3.15□□□□□ -1.91
CDX1P47902 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX1P47902 AC012181.1-201ENST00000479895 423 ntBASIC3.15□□□□□ -1.91
CDX1P47902 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.15□□□□□ -1.91
CDX1P47902 AC010460.1-201ENST00000507087 466 ntBASIC3.15□□□□□ -1.91
CDX1P47902 RN7SKP83-201ENST00000516512 178 ntBASIC3.15□□□□□ -1.91
CDX1P47902 RNU7-143P-201ENST00000516781 65 ntBASIC3.15□□□□□ -1.91
CDX1P47902 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX1P47902 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX1P47902 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX1P47902 AP000907.2-201ENST00000530827 353 ntBASIC3.15□□□□□ -1.91
CDX1P47902 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDX1P47902 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX1P47902 OR4T1P-201ENST00000554933 911 ntBASIC3.15□□□□□ -1.91
CDX1P47902 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX1P47902 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX1P47902 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.15□□□□□ -1.91
CDX1P47902 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.15□□□□□ -1.91
CDX1P47902 AC053481.4-201ENST00000583164 216 ntBASIC3.15□□□□□ -1.91
CDX1P47902 AL109653.1-201ENST00000603091 248 ntBASIC3.15□□□□□ -1.91
CDX1P47902 AC068313.1-201ENST00000604028 1008 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms