Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC023128.2-201ENST00000420880 1223 ntBASIC2.79□□□□□ -1.96
CLIP1P30622 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.79□□□□□ -1.96
CLIP1P30622 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.79□□□□□ -1.96
CLIP1P30622 AC126177.3-201ENST00000551839 688 ntBASIC2.79□□□□□ -1.96
CLIP1P30622 OR4U1P-201ENST00000554958 912 ntBASIC2.79□□□□□ -1.96
CLIP1P30622 AL049838.1-201ENST00000563647 981 ntBASIC2.79□□□□□ -1.96
CLIP1P30622 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.79□□□□□ -1.96
CLIP1P30622 DUXAP9-208ENST00000622815 614 ntBASIC2.79□□□□□ -1.96
CLIP1P30622 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLIP1P30622 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLIP1P30622 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLIP1P30622 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.78□□□□□ -1.96
CLIP1P30622 AC067805.1-201ENST00000559344 470 ntBASIC2.78□□□□□ -1.96
CLIP1P30622 MIR3935-201ENST00000583472 104 ntBASIC2.78□□□□□ -1.96
CLIP1P30622 MIR4781-201ENST00000585250 76 ntBASIC2.78□□□□□ -1.96
CLIP1P30622 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.78□□□□□ -1.96
CLIP1P30622 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.78□□□□□ -1.96
CLIP1P30622 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.78□□□□□ -1.96
CLIP1P30622 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.78□□□□□ -1.96
CLIP1P30622 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLIP1P30622 SNORD48-201ENST00000364953 64 ntBASIC2.77□□□□□ -1.97
CLIP1P30622 AP000567.1-201ENST00000406413 156 ntBASIC2.77□□□□□ -1.97
CLIP1P30622 RNU6-603P-201ENST00000411403 107 ntBASIC2.77□□□□□ -1.97
CLIP1P30622 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.77□□□□□ -1.97
CLIP1P30622 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.77□□□□□ -1.97
CLIP1P30622 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.77□□□□□ -1.97
CLIP1P30622 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.77□□□□□ -1.97
CLIP1P30622 CBX3P4-201ENST00000538909 354 ntBASIC2.77□□□□□ -1.97
CLIP1P30622 KATNBL1P1-201ENST00000605192 748 ntBASIC2.77□□□□□ -1.97
CLIP1P30622 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.77□□□□□ -1.97
CLIP1P30622 FGF7P8-201ENST00000402994 292 ntBASIC2.76□□□□□ -1.97
CLIP1P30622 AL645568.3-201ENST00000433683 316 ntBASIC2.76□□□□□ -1.97
CLIP1P30622 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.76□□□□□ -1.97
CLIP1P30622 CLIC4P1-201ENST00000453177 535 ntBASIC2.76□□□□□ -1.97
CLIP1P30622 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.76□□□□□ -1.97
CLIP1P30622 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.76□□□□□ -1.97
CLIP1P30622 MTCYBP37-201ENST00000510642 1133 ntBASIC2.76□□□□□ -1.97
CLIP1P30622 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.76□□□□□ -1.97
CLIP1P30622 MTCO3P24-201ENST00000572729 782 ntBASIC2.76□□□□□ -1.97
CLIP1P30622 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.76□□□□□ -1.97
CLIP1P30622 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CLIP1P30622 Y_RNA.508-201ENST00000384502 114 ntBASIC2.76□□□□□ -1.97
CLIP1P30622 AL021407.1-201ENST00000404531 386 ntBASIC2.76□□□□□ -1.97
CLIP1P30622 RNU4-62P-201ENST00000410125 130 ntBASIC2.76□□□□□ -1.97
CLIP1P30622 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.76□□□□□ -1.97
CLIP1P30622 MTND4LP13-201ENST00000425022 298 ntBASIC2.76□□□□□ -1.97
CLIP1P30622 AIG1P1-201ENST00000503376 148 ntBASIC2.76□□□□□ -1.97
CLIP1P30622 MIR4419B-201ENST00000577260 68 ntBASIC2.76□□□□□ -1.97
CLIP1P30622 MFSD8-245ENST00000641743 948 ntBASIC2.76□□□□□ -1.97
CLIP1P30622 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.75□□□□□ -1.97
CLIP1P30622 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.75□□□□□ -1.97
CLIP1P30622 OR51B8P-201ENST00000449892 769 ntBASIC2.75□□□□□ -1.97
CLIP1P30622 CDC42P1-201ENST00000456658 548 ntBASIC2.75□□□□□ -1.97
CLIP1P30622 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.75□□□□□ -1.97
CLIP1P30622 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.75□□□□□ -1.97
CLIP1P30622 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.75□□□□□ -1.97
CLIP1P30622 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.75□□□□□ -1.97
CLIP1P30622 MIR4303-201ENST00000581299 66 ntBASIC2.75□□□□□ -1.97
CLIP1P30622 AC104307.1-201ENST00000616142 196 ntBASIC2.75□□□□□ -1.97
CLIP1P30622 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.74□□□□□ -1.97
CLIP1P30622 BTF3P4-201ENST00000418852 495 ntBASIC2.74□□□□□ -1.97
CLIP1P30622 RPS7P5-201ENST00000441482 581 ntBASIC2.74□□□□□ -1.97
CLIP1P30622 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.74□□□□□ -1.97
CLIP1P30622 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.74□□□□□ -1.97
CLIP1P30622 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.74□□□□□ -1.97
CLIP1P30622 AC090953.1-201ENST00000604305 1092 ntBASIC2.74□□□□□ -1.97
CLIP1P30622 AC009570.1-201ENST00000609599 745 ntBASIC2.74□□□□□ -1.97
CLIP1P30622 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CLIP1P30622 AC091046.2-201ENST00000620775 665 ntBASIC2.74□□□□□ -1.97
CLIP1P30622 AC010872.1-201ENST00000624225 675 ntBASIC2.74□□□□□ -1.97
CLIP1P30622 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLIP1P30622 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.73□□□□□ -1.97
CLIP1P30622 AL139811.1-201ENST00000424779 2299 ntBASIC2.73□□□□□ -1.97
CLIP1P30622 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLIP1P30622 HSPE1P11-201ENST00000339579 310 ntBASIC2.73□□□□□ -1.97
CLIP1P30622 SUMO2P12-201ENST00000405924 140 ntBASIC2.73□□□□□ -1.97
CLIP1P30622 RNA5SP489-201ENST00000410986 109 ntBASIC2.73□□□□□ -1.97
CLIP1P30622 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP1P30622 RNA5SP445-201ENST00000515889 115 ntBASIC2.73□□□□□ -1.97
CLIP1P30622 RNU6-964P-201ENST00000516524 69 ntBASIC2.73□□□□□ -1.97
CLIP1P30622 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.73□□□□□ -1.97
CLIP1P30622 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP1P30622 AC007375.1-201ENST00000554513 578 ntBASIC2.73□□□□□ -1.97
CLIP1P30622 AC123786.2-201ENST00000603459 275 ntBASIC2.73□□□□□ -1.97
CLIP1P30622 AL359821.1-201ENST00000605519 182 ntBASIC2.73□□□□□ -1.97
CLIP1P30622 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.72□□□□□ -1.97
CLIP1P30622 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLIP1P30622 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.72□□□□□ -1.97
CLIP1P30622 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLIP1P30622 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.72□□□□□ -1.97
CLIP1P30622 RPL36AP21-201ENST00000490372 323 ntBASIC2.72□□□□□ -1.97
CLIP1P30622 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP1P30622 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.72□□□□□ -1.97
CLIP1P30622 HSPE1P20-201ENST00000538133 289 ntBASIC2.72□□□□□ -1.97
CLIP1P30622 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP1P30622 DNAJC19P9-201ENST00000555084 351 ntBASIC2.72□□□□□ -1.97
CLIP1P30622 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP1P30622 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP1P30622 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP1P30622 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms