| TFE3 | P19532 | VCAM1-203 | ENST00000370115 | 2475 nt | TSL 5 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL050331.3-201 | ENST00000448740 | 2081 nt | TSL 2 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | ESRRG-202 | ENST00000360012 | 5431 nt | APPRIS P1 TSL 1 (best) BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | OR10A5-201 | ENST00000299454 | 1054 nt | APPRIS P1 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNU6-1252P-201 | ENST00000363054 | 104 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNU6-254P-201 | ENST00000363377 | 107 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | Y_RNA.187-201 | ENST00000363918 | 113 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | SNORA58B-201 | ENST00000364259 | 136 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | SMIM11P1-201 | ENST00000369586 | 178 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | Y_RNA.395-201 | ENST00000383945 | 109 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNU6-1127P-201 | ENST00000384580 | 107 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL109947.1-201 | ENST00000423747 | 382 nt | TSL 2 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL022396.1-201 | ENST00000427011 | 386 nt | TSL 3 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | FABP5P14-201 | ENST00000437273 | 393 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RPL35AP21-201 | ENST00000437667 | 333 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | CEACAMP7-201 | ENST00000444105 | 496 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL391427.1-201 | ENST00000451575 | 425 nt | TSL 3 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | LINC01077-201 | ENST00000452288 | 413 nt | TSL 3 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | FGF7P3-201 | ENST00000454645 | 303 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | PTCHD1-AS-201 | ENST00000455399 | 718 nt | TSL 3 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC010631.1-201 | ENST00000474150 | 156 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | MGC32805-203 | ENST00000506053 | 652 nt | TSL 3 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | MEPE-206 | ENST00000511670 | 550 nt | TSL 4 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNU6-1095P-201 | ENST00000516148 | 108 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC090809.1-201 | ENST00000524132 | 570 nt | TSL 4 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | APOOP3-201 | ENST00000536787 | 586 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC008033.2-201 | ENST00000542626 | 177 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC135001.1-201 | ENST00000544546 | 283 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC022035.1-201 | ENST00000579923 | 302 nt | TSL 2 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | MIR5690-201 | ENST00000583739 | 73 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL109935.2-201 | ENST00000587737 | 395 nt | TSL 5 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC023043.2-201 | ENST00000589678 | 1026 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | OR7A5-202 | ENST00000594432 | 1029 nt | APPRIS P1 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC020910.1-201 | ENST00000599404 | 413 nt | TSL 5 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC174048.1-201 | ENST00000603389 | 144 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC012409.4-201 | ENST00000612923 | 249 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC008121.3-201 | ENST00000618726 | 433 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC091905.4-201 | ENST00000623432 | 202 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL138828.1-201 | ENST00000626414 | 291 nt | TSL 5 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC010976.1-210 | ENST00000630740 | 1005 nt | TSL 5 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | DTNA-203 | ENST00000315456 | 1706 nt | TSL 1 (best) BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | ABCC9-204 | ENST00000538350 | 2672 nt | TSL 2 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | GPR34-201 | ENST00000378138 | 1815 nt | APPRIS P1 TSL 1 (best) BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | ZEB1-208 | ENST00000542815 | 3217 nt | APPRIS ALT2 TSL 2 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | APAF1-209 | ENST00000550527 | 6581 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | LINC00158-201 | ENST00000332587 | 1476 nt | TSL 1 (best) BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | NADK2-203 | ENST00000397338 | 3614 nt | TSL 2 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | DYTN-201 | ENST00000452335 | 2051 nt | APPRIS P1 TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | NBPF10-202 | ENST00000617010 | 11630 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | FANCD2-202 | ENST00000383807 | 5102 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | WDR63-203 | ENST00000370596 | 2905 nt | APPRIS ALT2 TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | MLH3-210 | ENST00000556257 | 4229 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | UGP2-229 | ENST00000613823 | 1858 nt | APPRIS ALT1 TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | OR10A7-201 | ENST00000326258 | 951 nt | APPRIS P1 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | Y_RNA.145-201 | ENST00000363527 | 102 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNU6-263P-201 | ENST00000363811 | 107 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNU4-78P-201 | ENST00000410940 | 126 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC099677.1-201 | ENST00000420575 | 175 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC009478.1-201 | ENST00000429816 | 562 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL354863.1-202 | ENST00000431695 | 494 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL691515.1-201 | ENST00000432976 | 733 nt | TSL 2 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | TRAPPC2P9-201 | ENST00000434556 | 343 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC005019.1-201 | ENST00000436455 | 431 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | LINC01710-201 | ENST00000446002 | 390 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RPS15AP27-201 | ENST00000449183 | 343 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | FABP5P13-201 | ENST00000452144 | 328 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RN7SL329P-201 | ENST00000467740 | 299 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RN7SL826P-201 | ENST00000479724 | 288 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RN7SL97P-201 | ENST00000486780 | 299 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC073073.1-201 | ENST00000493920 | 463 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC096736.2-201 | ENST00000507972 | 175 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RBBP4P6-201 | ENST00000508098 | 202 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC109464.3-201 | ENST00000509456 | 204 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RAD21-204 | ENST00000518055 | 896 nt | TSL 2 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | FAM92A-209 | ENST00000519679 | 538 nt | TSL 4 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC104211.1-202 | ENST00000521307 | 866 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RPL23AP53-201 | ENST00000521854 | 457 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC051619.2-201 | ENST00000559063 | 397 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC005899.1-201 | ENST00000584125 | 563 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL589765.7-201 | ENST00000601684 | 629 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC022893.3-201 | ENST00000607665 | 437 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | U2.17-201 | ENST00000611454 | 95 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC015871.5-202 | ENST00000623252 | 701 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC008013.2-202 | ENST00000637965 | 364 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | TMEM59-205 | ENST00000371348 | 1911 nt | TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | PLCB4-204 | ENST00000378501 | 5833 nt | APPRIS P4 TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | ORC3-201 | ENST00000257789 | 2501 nt | APPRIS P3 TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| TFE3 | P19532 | SLC9B1-202 | ENST00000394789 | 1735 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| TFE3 | P19532 | TCP11X1-203 | ENST00000623912 | 1715 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| TFE3 | P19532 | SCARNA15-201 | ENST00000607520 | 4325 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| TFE3 | P19532 | SASS6-201 | ENST00000287482 | 3880 nt | APPRIS P1 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| TFE3 | P19532 | ZBTB44-210 | ENST00000530205 | 2179 nt | TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNU6-1155P-201 | ENST00000363554 | 107 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| TFE3 | P19532 | Y_RNA.197-201 | ENST00000364004 | 102 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| TFE3 | P19532 | Y_RNA.216-201 | ENST00000364205 | 93 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| TFE3 | P19532 | S100A12-201 | ENST00000368737 | 518 nt | APPRIS P1 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNU6-701P-201 | ENST00000384059 | 107 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| TFE3 | P19532 | Y_RNA.482-201 | ENST00000384377 | 111 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNA5SP219-201 | ENST00000390940 | 113 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNU6-837P-201 | ENST00000391056 | 108 nt | BASIC | 5.11 | □□□□□ -1.59 | | |