Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGA1P17096 MIR144-201ENST00000384886 86 ntBASIC1.84□□□□□ -2.11
HMGA1P17096 RPL31P52-201ENST00000407532 367 ntBASIC1.84□□□□□ -2.11
HMGA1P17096 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.84□□□□□ -2.11
HMGA1P17096 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.84□□□□□ -2.11
HMGA1P17096 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGA1P17096 AC114973.1-201ENST00000429057 632 ntBASIC1.84□□□□□ -2.11
HMGA1P17096 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGA1P17096 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGA1P17096 AL645568.3-201ENST00000433683 316 ntBASIC1.84□□□□□ -2.11
HMGA1P17096 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGA1P17096 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGA1P17096 AC007375.1-201ENST00000554513 578 ntBASIC1.84□□□□□ -2.11
HMGA1P17096 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGA1P17096 MIR3935-201ENST00000583472 104 ntBASIC1.84□□□□□ -2.11
HMGA1P17096 AC013444.2-201ENST00000603317 787 ntBASIC1.84□□□□□ -2.11
HMGA1P17096 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
HMGA1P17096 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
HMGA1P17096 AC080100.1-201ENST00000624239 5356 ntBASIC1.84□□□□□ -2.12
HMGA1P17096 KPNA2P1-201ENST00000458289 1591 ntBASIC1.84□□□□□ -2.12
HMGA1P17096 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.12
HMGA1P17096 AL161781.1-201ENST00000354277 403 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 MIR92A2-201ENST00000385299 75 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 AC240504.1-201ENST00000395709 845 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 BX682237.1-201ENST00000415016 335 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 RPS15AP7-201ENST00000439294 405 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 AP000926.3-201ENST00000497201 299 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGA1P17096 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.83□□□□□ -2.12
HMGA1P17096 AC025755.1-201ENST00000521306 278 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 AC007115.1-201ENST00000546853 234 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 AC090751.1-201ENST00000566966 267 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 DUXAP4-201ENST00000603046 613 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 AC121761.2-201ENST00000617300 689 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 AC108479.2-201ENST00000617314 601 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 NR1H5P-201ENST00000452683 1377 ntBASIC1.83□□□□□ -2.12
HMGA1P17096 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
HMGA1P17096 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMGA1P17096 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMGA1P17096 RNU6-600P-201ENST00000362524 99 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 Y_RNA.140-201ENST00000363474 103 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 RNU6-457P-201ENST00000363999 107 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 RNU6-304P-201ENST00000364855 107 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMGA1P17096 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
HMGA1P17096 AC073264.1-201ENST00000411508 416 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 LUZP4P1-201ENST00000415420 344 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 AC108667.1-201ENST00000428618 249 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 RPL23AP70-201ENST00000483361 460 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 MTCO2P9-201ENST00000503214 694 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGA1P17096 HMGN1P28-201ENST00000521340 364 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGA1P17096 GNAI2P1-201ENST00000541815 315 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGA1P17096 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGA1P17096 AL109653.1-201ENST00000603091 248 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 LLPHP1-201ENST00000603571 367 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 RNA5SP108-201ENST00000605921 117 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.82□□□□□ -2.12
HMGA1P17096 AL136520.1-201ENST00000600311 1322 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMGA1P17096 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.82□□□□□ -2.12
HMGA1P17096 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HMGA1P17096 AL157700.1-201ENST00000561973 1432 ntBASIC1.82□□□□□ -2.12
HMGA1P17096 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.81□□□□□ -2.12
HMGA1P17096 Z98749.2-208ENST00000381646 500 ntBASIC1.81□□□□□ -2.12
HMGA1P17096 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMGA1P17096 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.81□□□□□ -2.12
HMGA1P17096 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGA1P17096 XKRY2-201ENST00000442362 1093 ntBASIC1.81□□□□□ -2.12
HMGA1P17096 RPS26P30-201ENST00000443431 335 ntBASIC1.81□□□□□ -2.12
HMGA1P17096 HMGN2P16-201ENST00000456802 261 ntBASIC1.81□□□□□ -2.12
HMGA1P17096 SEM1P1-201ENST00000506694 209 ntBASIC1.81□□□□□ -2.12
HMGA1P17096 ATP5F1P5-201ENST00000526403 760 ntBASIC1.81□□□□□ -2.12
HMGA1P17096 OR11H5P-201ENST00000554039 926 ntBASIC1.81□□□□□ -2.12
HMGA1P17096 AC092159.4-201ENST00000624944 550 ntBASIC1.81□□□□□ -2.12
HMGA1P17096 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.81□□□□□ -2.12
HMGA1P17096 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMGA1P17096 MIR607-201ENST00000385241 96 ntBASIC1.8□□□□□ -2.12
HMGA1P17096 AL356057.2-201ENST00000403318 432 ntBASIC1.8□□□□□ -2.12
HMGA1P17096 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGA1P17096 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.8□□□□□ -2.12
HMGA1P17096 SUMO1P4-201ENST00000429430 302 ntBASIC1.8□□□□□ -2.12
HMGA1P17096 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGA1P17096 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGA1P17096 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.8□□□□□ -2.12
HMGA1P17096 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGA1P17096 RPL23AP55-201ENST00000498163 452 ntBASIC1.8□□□□□ -2.12
HMGA1P17096 NAMPTP2-201ENST00000505629 1115 ntBASIC1.8□□□□□ -2.12
HMGA1P17096 RNU6-711P-201ENST00000517255 106 ntBASIC1.8□□□□□ -2.12
HMGA1P17096 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGA1P17096 AC067805.1-201ENST00000559344 470 ntBASIC1.8□□□□□ -2.12
HMGA1P17096 AC234775.3-201ENST00000564612 656 ntBASIC1.8□□□□□ -2.12
HMGA1P17096 MIR5694-201ENST00000581190 76 ntBASIC1.8□□□□□ -2.12
HMGA1P17096 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGA1P17096 AL590099.1-201ENST00000615276 138 ntBASIC1.8□□□□□ -2.12
HMGA1P17096 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms