Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD8P13378 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HOXD8P13378 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD8P13378 RNU6-490P-201ENST00000362985 107 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 Y_RNA.307-201ENST00000365022 117 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 RPS16P5-201ENST00000406501 404 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 U3.32-201ENST00000408116 212 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 Y_RNA.594-201ENST00000410373 140 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 RNU4-61P-201ENST00000411243 107 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 AC080125.1-201ENST00000414888 684 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXD8P13378 AC119751.6-201ENST00000416712 186 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 AC008267.5-201ENST00000424928 265 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXD8P13378 RPL35AP22-201ENST00000436855 335 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 AC105402.2-201ENST00000438503 358 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 RPS17P13-201ENST00000448974 407 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXD8P13378 AP002812.1-201ENST00000495378 474 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXD8P13378 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXD8P13378 RNU6-470P-201ENST00000515954 104 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD8P13378 AP000827.1-201ENST00000527814 258 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 GNAI2P1-201ENST00000541815 315 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 AC209154.1-201ENST00000582156 337 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 AL138889.2-201ENST00000603883 242 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 AC018889.1-201ENST00000605372 397 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 AL589994.2-201ENST00000621124 579 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD8P13378 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD8P13378 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD8P13378 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HOXD8P13378 AC011755.1-201ENST00000623763 2049 ntBASIC5.52□□□□□ -1.53
HOXD8P13378 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXD8P13378 AL360270.2-201ENST00000562952 5985 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXD8P13378 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXD8P13378 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXD8P13378 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXD8P13378 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXD8P13378 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXD8P13378 SNORA70.10-201ENST00000384515 134 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 RNU6-1127P-201ENST00000384580 107 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HOXD8P13378 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXD8P13378 AC069213.2-201ENST00000420238 366 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 RPL21P109-201ENST00000422213 475 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
HOXD8P13378 AC005154.2-201ENST00000438110 379 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 MTND2P29-201ENST00000438595 412 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 AC243772.1-201ENST00000451620 410 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 ABCC13-202ENST00000463099 3842 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 DYNLL1P5-201ENST00000467158 270 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 RN7SL459P-201ENST00000481078 302 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 IGLVIV-53-201ENST00000520107 367 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 NDUFB4P11-201ENST00000560510 395 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXD8P13378 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXD8P13378 AC062037.2-201ENST00000610137 73 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 AC074140.1-201ENST00000621617 208 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 AC138627.2-201ENST00000624202 601 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXD8P13378 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
HOXD8P13378 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HOXD8P13378 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HOXD8P13378 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXD8P13378 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.51□□□□□ -1.53
HOXD8P13378 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXD8P13378 EXOC5P1-201ENST00000510543 1969 ntBASIC5.51□□□□□ -1.53
HOXD8P13378 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXD8P13378 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXD8P13378 SMG1P7-201ENST00000565246 2704 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXD8P13378 AC092079.1-201ENST00000558620 1985 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXD8P13378 RNU6-960P-201ENST00000364056 120 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 RNU6-450P-201ENST00000364654 107 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXD8P13378 RNU6-128P-201ENST00000383976 107 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 Y_RNA.404-201ENST00000383978 102 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 SNORD70.1-201ENST00000391007 85 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 RNA5SP111-201ENST00000411386 101 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 AL356968.1-201ENST00000416622 474 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 AL669831.1-202ENST00000428504 417 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 HMGB1P12-201ENST00000438594 598 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 AC092013.1-201ENST00000438795 332 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 SUMO1P3-201ENST00000439961 304 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 AC005094.1-201ENST00000440420 368 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HOXD8P13378 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXD8P13378 OR1H1P-201ENST00000448731 937 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXD8P13378 PCNPP5-201ENST00000452246 481 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXD8P13378 AC091180.1-201ENST00000462104 372 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 AC053481.1-201ENST00000467217 306 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 AC022034.3-201ENST00000471393 478 ntBASIC5.5□□□□□ -1.53
HOXD8P13378 RBBP4P6-201ENST00000508098 202 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms