Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 Y_RNA.474-201ENST00000384341 102 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 RNU6-692P-201ENST00000384496 107 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 RNA5SP56-201ENST00000410277 118 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.68□□□□□ -1.66
COL6A2P12110 ARL5AP1-201ENST00000418991 388 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.68□□□□□ -1.66
COL6A2P12110 HMGB1P18-201ENST00000438801 619 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 PTMAP6-201ENST00000439110 327 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 MTCYBP6-201ENST00000441810 138 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.68□□□□□ -1.66
COL6A2P12110 RPS29P15-201ENST00000458329 171 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 SNORD97-201ENST00000459187 142 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 RPL21P99-201ENST00000480369 423 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.68□□□□□ -1.66
COL6A2P12110 RN7SL808P-201ENST00000496066 299 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 AC135721.1-201ENST00000497954 479 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.68□□□□□ -1.66
COL6A2P12110 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.68□□□□□ -1.66
COL6A2P12110 AC108043.1-201ENST00000512696 574 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.68□□□□□ -1.66
COL6A2P12110 AC100870.1-201ENST00000522035 505 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 FAM60DP-201ENST00000524174 632 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.68□□□□□ -1.66
COL6A2P12110 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL6A2P12110 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.68□□□□□ -1.66
COL6A2P12110 MIR4293-201ENST00000584305 78 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.68□□□□□ -1.66
COL6A2P12110 AC020910.3-201ENST00000603701 874 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 AL022345.1-201ENST00000607292 135 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 Y_RNA.812-201ENST00000610788 101 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 AL121612.2-201ENST00000612261 482 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 Y_RNA.784-201ENST00000613803 101 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 Y_RNA.787-201ENST00000616522 101 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 Y_RNA.780-201ENST00000617336 101 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 Y_RNA.801-201ENST00000619005 101 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 AL136313.1-201ENST00000624804 202 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 MIR6715B-201ENST00000637172 77 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL6A2P12110 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL6A2P12110 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COL6A2P12110 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.68□□□□□ -1.66
COL6A2P12110 AL136164.3-201ENST00000624429 3978 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 AC116667.1-201ENST00000604855 2072 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL6A2P12110 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.67□□□□□ -1.66
COL6A2P12110 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL6A2P12110 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL6A2P12110 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
COL6A2P12110 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL6A2P12110 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
COL6A2P12110 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL6A2P12110 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.67□□□□□ -1.66
COL6A2P12110 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
COL6A2P12110 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.67□□□□□ -1.66
COL6A2P12110 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
COL6A2P12110 RNU6-989P-201ENST00000362756 107 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 Y_RNA.67-201ENST00000362870 100 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 RNU1-20P-201ENST00000363314 162 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
COL6A2P12110 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL6A2P12110 RNA5SP372-201ENST00000390836 115 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COL6A2P12110 AL590004.1-201ENST00000405321 300 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 MIR1250-201ENST00000408098 113 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 RNU2-47P-201ENST00000410649 186 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 RNA5SP107-201ENST00000411358 122 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 AL160275.2-201ENST00000412010 394 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.67□□□□□ -1.66
COL6A2P12110 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.67□□□□□ -1.66
COL6A2P12110 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.67□□□□□ -1.66
COL6A2P12110 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 AC010655.1-201ENST00000449336 292 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 AL118520.1-201ENST00000450770 291 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 AL121877.1-201ENST00000453704 622 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 RPS5P7-201ENST00000456664 608 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 RNU7-180P-201ENST00000459240 63 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.67□□□□□ -1.66
COL6A2P12110 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.67□□□□□ -1.66
COL6A2P12110 BX284632.1-201ENST00000478218 541 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.67□□□□□ -1.66
COL6A2P12110 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.67□□□□□ -1.66
COL6A2P12110 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.67□□□□□ -1.66
COL6A2P12110 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL6A2P12110 FAM206BP-201ENST00000510179 541 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 HMGN1P28-201ENST00000521340 364 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 CR383656.7-201ENST00000548164 174 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 SCOCP1-201ENST00000554676 349 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.67□□□□□ -1.66
COL6A2P12110 MIR4703-201ENST00000577728 79 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 MIR3691-201ENST00000578066 90 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.67□□□□□ -1.66
COL6A2P12110 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.67□□□□□ -1.66
COL6A2P12110 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.67□□□□□ -1.66
COL6A2P12110 AC022432.1-201ENST00000595739 310 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.67□□□□□ -1.66
COL6A2P12110 RPL7P50-201ENST00000600588 727 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 AL161729.3-201ENST00000603533 673 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.67□□□□□ -1.66
COL6A2P12110 AC104237.2-201ENST00000612456 443 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms