Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.89□□□□□ -1.95
TOP2AP11388 AC083899.3-201ENST00000603413 594 ntBASIC2.89□□□□□ -1.95
TOP2AP11388 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
TOP2AP11388 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
TOP2AP11388 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.88□□□□□ -1.95
TOP2AP11388 MIR337-201ENST00000362281 93 ntBASIC2.88□□□□□ -1.95
TOP2AP11388 RNU4-74P-201ENST00000411280 161 ntBASIC2.88□□□□□ -1.95
TOP2AP11388 POLHP1-201ENST00000411806 470 ntBASIC2.88□□□□□ -1.95
TOP2AP11388 AC109471.1-201ENST00000511631 612 ntBASIC2.88□□□□□ -1.95
TOP2AP11388 AC005539.1-201ENST00000443768 1479 ntBASIC2.88□□□□□ -1.95
TOP2AP11388 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TOP2AP11388 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TOP2AP11388 AL450338.1-201ENST00000407987 512 ntBASIC2.88□□□□□ -1.95
TOP2AP11388 AC234782.4-201ENST00000417646 1048 ntBASIC2.88□□□□□ -1.95
TOP2AP11388 AC114973.1-201ENST00000429057 632 ntBASIC2.88□□□□□ -1.95
TOP2AP11388 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.88□□□□□ -1.95
TOP2AP11388 AC079203.1-201ENST00000487972 404 ntBASIC2.88□□□□□ -1.95
TOP2AP11388 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.88□□□□□ -1.95
TOP2AP11388 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.88□□□□□ -1.95
TOP2AP11388 AL512598.1-201ENST00000610158 273 ntBASIC2.88□□□□□ -1.95
TOP2AP11388 AC000123.2-201ENST00000623124 461 ntBASIC2.88□□□□□ -1.95
TOP2AP11388 AC092159.4-201ENST00000624944 550 ntBASIC2.88□□□□□ -1.95
TOP2AP11388 AL118496.1-201ENST00000440201 1812 ntBASIC2.87□□□□□ -1.95
TOP2AP11388 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
TOP2AP11388 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TOP2AP11388 AC090255.1-201ENST00000495779 349 ntBASIC2.87□□□□□ -1.95
TOP2AP11388 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.87□□□□□ -1.95
TOP2AP11388 AC109464.2-201ENST00000510242 943 ntBASIC2.87□□□□□ -1.95
TOP2AP11388 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.87□□□□□ -1.95
TOP2AP11388 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.87□□□□□ -1.95
TOP2AP11388 RPL23AP88-201ENST00000605759 454 ntBASIC2.87□□□□□ -1.95
TOP2AP11388 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.86□□□□□ -1.95
TOP2AP11388 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TOP2AP11388 AC109583.1-201ENST00000432156 268 ntBASIC2.86□□□□□ -1.95
TOP2AP11388 AC124916.1-201ENST00000444020 547 ntBASIC2.86□□□□□ -1.95
TOP2AP11388 TAF9P1-201ENST00000445421 515 ntBASIC2.86□□□□□ -1.95
TOP2AP11388 TAF9P2-201ENST00000454958 515 ntBASIC2.86□□□□□ -1.95
TOP2AP11388 MTND4LP22-201ENST00000508209 276 ntBASIC2.86□□□□□ -1.95
TOP2AP11388 HMGB1P47-201ENST00000511281 589 ntBASIC2.86□□□□□ -1.95
TOP2AP11388 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.86□□□□□ -1.95
TOP2AP11388 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.86□□□□□ -1.95
TOP2AP11388 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.86□□□□□ -1.95
TOP2AP11388 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
TOP2AP11388 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.86□□□□□ -1.95
TOP2AP11388 AC012360.2-201ENST00000609349 391 ntBASIC2.86□□□□□ -1.95
TOP2AP11388 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.86□□□□□ -1.95
TOP2AP11388 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TOP2AP11388 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TOP2AP11388 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TOP2AP11388 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TOP2AP11388 AC013404.1-201ENST00000413068 249 ntBASIC2.85□□□□□ -1.95
TOP2AP11388 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.85□□□□□ -1.95
TOP2AP11388 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TOP2AP11388 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.85□□□□□ -1.95
TOP2AP11388 TPT1P14-201ENST00000448018 505 ntBASIC2.85□□□□□ -1.95
TOP2AP11388 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TOP2AP11388 AC013444.2-201ENST00000603317 787 ntBASIC2.85□□□□□ -1.95
TOP2AP11388 DUXAP3-201ENST00000603616 594 ntBASIC2.85□□□□□ -1.95
TOP2AP11388 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TOP2AP11388 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
TOP2AP11388 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
TOP2AP11388 METTL21EP-201ENST00000298105 713 ntBASIC2.84□□□□□ -1.95
TOP2AP11388 SNORA25.9-201ENST00000365087 128 ntBASIC2.84□□□□□ -1.95
TOP2AP11388 RNU6-174P-201ENST00000410406 106 ntBASIC2.84□□□□□ -1.95
TOP2AP11388 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.84□□□□□ -1.95
TOP2AP11388 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.84□□□□□ -1.95
TOP2AP11388 SNORA31.11-201ENST00000516528 139 ntBASIC2.84□□□□□ -1.95
TOP2AP11388 RN7SKP82-201ENST00000516786 223 ntBASIC2.84□□□□□ -1.95
TOP2AP11388 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.84□□□□□ -1.95
TOP2AP11388 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.84□□□□□ -1.95
TOP2AP11388 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.84□□□□□ -1.95
TOP2AP11388 AC004520.1-201ENST00000608362 1413 ntBASIC2.84□□□□□ -1.95
TOP2AP11388 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.84□□□□□ -1.95
TOP2AP11388 AC090897.3-201ENST00000636973 1157 ntBASIC2.84□□□□□ -1.95
TOP2AP11388 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.84□□□□□ -1.95
TOP2AP11388 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.84□□□□□ -1.95
TOP2AP11388 MTND4P1-201ENST00000457501 1466 ntBASIC2.84□□□□□ -1.95
TOP2AP11388 MIR489-201ENST00000384923 84 ntBASIC2.83□□□□□ -1.96
TOP2AP11388 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
TOP2AP11388 MIR1276-201ENST00000408707 83 ntBASIC2.83□□□□□ -1.96
TOP2AP11388 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.83□□□□□ -1.96
TOP2AP11388 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.83□□□□□ -1.96
TOP2AP11388 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TOP2AP11388 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.83□□□□□ -1.96
TOP2AP11388 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.83□□□□□ -1.96
TOP2AP11388 DUXAP9-208ENST00000622815 614 ntBASIC2.83□□□□□ -1.96
TOP2AP11388 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.83□□□□□ -1.96
TOP2AP11388 AC011155.1-201ENST00000316512 456 ntBASIC2.83□□□□□ -1.96
TOP2AP11388 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.83□□□□□ -1.96
TOP2AP11388 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.83□□□□□ -1.96
TOP2AP11388 ARPC3P1-201ENST00000437218 533 ntBASIC2.83□□□□□ -1.96
TOP2AP11388 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.83□□□□□ -1.96
TOP2AP11388 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.83□□□□□ -1.96
TOP2AP11388 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.83□□□□□ -1.96
TOP2AP11388 MIR4421-201ENST00000578133 69 ntBASIC2.83□□□□□ -1.96
TOP2AP11388 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.83□□□□□ -1.96
TOP2AP11388 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
TOP2AP11388 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TOP2AP11388 MCTS2P-201ENST00000394552 546 ntBASIC2.82□□□□□ -1.96
TOP2AP11388 RNU2-68P-201ENST00000410878 191 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms