Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC092573.2-201ENST00000434546 243 ntBASIC2.82□□□□□ -1.96
TPM1P09493 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.82□□□□□ -1.96
TPM1P09493 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.82□□□□□ -1.96
TPM1P09493 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TPM1P09493 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.82□□□□□ -1.96
TPM1P09493 AC011352.3-201ENST00000505162 593 ntBASIC2.82□□□□□ -1.96
TPM1P09493 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.82□□□□□ -1.96
TPM1P09493 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.82□□□□□ -1.96
TPM1P09493 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.82□□□□□ -1.96
TPM1P09493 HMGB1P14-201ENST00000557424 591 ntBASIC2.82□□□□□ -1.96
TPM1P09493 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.82□□□□□ -1.96
TPM1P09493 AC090616.3-201ENST00000582184 217 ntBASIC2.82□□□□□ -1.96
TPM1P09493 MIR5194-201ENST00000582634 120 ntBASIC2.82□□□□□ -1.96
TPM1P09493 AC012493.2-201ENST00000595083 291 ntBASIC2.82□□□□□ -1.96
TPM1P09493 GAS5-AS1-201ENST00000602767 694 ntBASIC2.82□□□□□ -1.96
TPM1P09493 AL137847.3-201ENST00000611521 109 ntBASIC2.82□□□□□ -1.96
TPM1P09493 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
TPM1P09493 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.82□□□□□ -1.96
TPM1P09493 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.82□□□□□ -1.96
TPM1P09493 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.82□□□□□ -1.96
TPM1P09493 TPTE2P4-201ENST00000258589 1605 ntBASIC2.82□□□□□ -1.96
TPM1P09493 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TPM1P09493 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.81□□□□□ -1.96
TPM1P09493 MIR144-201ENST00000384886 86 ntBASIC2.81□□□□□ -1.96
TPM1P09493 RNU6-882P-201ENST00000391025 103 ntBASIC2.81□□□□□ -1.96
TPM1P09493 RPLP0P7-201ENST00000416050 667 ntBASIC2.81□□□□□ -1.96
TPM1P09493 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.81□□□□□ -1.96
TPM1P09493 AL389915.1-201ENST00000422463 466 ntBASIC2.81□□□□□ -1.96
TPM1P09493 AL365496.1-201ENST00000426885 215 ntBASIC2.81□□□□□ -1.96
TPM1P09493 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.81□□□□□ -1.96
TPM1P09493 AL139132.1-201ENST00000431587 344 ntBASIC2.81□□□□□ -1.96
TPM1P09493 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.81□□□□□ -1.96
TPM1P09493 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.81□□□□□ -1.96
TPM1P09493 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.81□□□□□ -1.96
TPM1P09493 AL671855.1-201ENST00000446875 1203 ntBASIC2.81□□□□□ -1.96
TPM1P09493 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TPM1P09493 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.81□□□□□ -1.96
TPM1P09493 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.81□□□□□ -1.96
TPM1P09493 FTH1P2-201ENST00000466086 412 ntBASIC2.81□□□□□ -1.96
TPM1P09493 OR52A4P-202ENST00000481634 799 ntBASIC2.81□□□□□ -1.96
TPM1P09493 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.81□□□□□ -1.96
TPM1P09493 RPS27P26-201ENST00000494583 239 ntBASIC2.81□□□□□ -1.96
TPM1P09493 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TPM1P09493 ARL2BPP5-201ENST00000523141 481 ntBASIC2.81□□□□□ -1.96
TPM1P09493 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.81□□□□□ -1.96
TPM1P09493 AC022080.3-201ENST00000544433 482 ntBASIC2.81□□□□□ -1.96
TPM1P09493 AC010546.1-201ENST00000569391 485 ntBASIC2.81□□□□□ -1.96
TPM1P09493 AC079791.1-201ENST00000605356 973 ntBASIC2.81□□□□□ -1.96
TPM1P09493 AC245517.5-201ENST00000611529 162 ntBASIC2.81□□□□□ -1.96
TPM1P09493 AC025588.4-201ENST00000615802 908 ntBASIC2.81□□□□□ -1.96
TPM1P09493 AC104820.1-201ENST00000624183 307 ntBASIC2.81□□□□□ -1.96
TPM1P09493 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TPM1P09493 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TPM1P09493 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.81□□□□□ -1.96
TPM1P09493 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.8□□□□□ -1.96
TPM1P09493 SGO1P1-201ENST00000603525 1447 ntBASIC2.8□□□□□ -1.96
TPM1P09493 SNORA18.3-201ENST00000384122 132 ntBASIC2.8□□□□□ -1.96
TPM1P09493 SNORA80E-201ENST00000384744 137 ntBASIC2.8□□□□□ -1.96
TPM1P09493 AL162578.1-201ENST00000406202 378 ntBASIC2.8□□□□□ -1.96
TPM1P09493 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.8□□□□□ -1.96
TPM1P09493 BX510359.1-201ENST00000456973 237 ntBASIC2.8□□□□□ -1.96
TPM1P09493 AC026427.2-201ENST00000506228 536 ntBASIC2.8□□□□□ -1.96
TPM1P09493 HIGD1AP13-201ENST00000509878 289 ntBASIC2.8□□□□□ -1.96
TPM1P09493 AC008716.1-201ENST00000511084 513 ntBASIC2.8□□□□□ -1.96
TPM1P09493 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.8□□□□□ -1.96
TPM1P09493 RNA5SP82-201ENST00000516707 92 ntBASIC2.8□□□□□ -1.96
TPM1P09493 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.8□□□□□ -1.96
TPM1P09493 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.8□□□□□ -1.96
TPM1P09493 CKS1BP7-201ENST00000522230 235 ntBASIC2.8□□□□□ -1.96
TPM1P09493 OR4R1P-201ENST00000529879 463 ntBASIC2.8□□□□□ -1.96
TPM1P09493 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.8□□□□□ -1.96
TPM1P09493 AC106734.1-201ENST00000568646 663 ntBASIC2.8□□□□□ -1.96
TPM1P09493 HMGB1P6-201ENST00000569046 646 ntBASIC2.8□□□□□ -1.96
TPM1P09493 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.8□□□□□ -1.96
TPM1P09493 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.8□□□□□ -1.96
TPM1P09493 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.8□□□□□ -1.96
TPM1P09493 AC097504.2-201ENST00000608088 454 ntBASIC2.8□□□□□ -1.96
TPM1P09493 AC034102.8-201ENST00000615146 484 ntBASIC2.8□□□□□ -1.96
TPM1P09493 RMST_10.1-201ENST00000616309 154 ntBASIC2.8□□□□□ -1.96
TPM1P09493 AC006213.5-201ENST00000619673 288 ntBASIC2.8□□□□□ -1.96
TPM1P09493 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
TPM1P09493 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TPM1P09493 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.8□□□□□ -1.96
TPM1P09493 MFSD8-213ENST00000641134 1327 ntBASIC2.79□□□□□ -1.96
TPM1P09493 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
TPM1P09493 FRG1BP-201ENST00000278882 761 ntBASIC2.79□□□□□ -1.96
TPM1P09493 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TPM1P09493 RNU6-115P-201ENST00000364310 107 ntBASIC2.79□□□□□ -1.96
TPM1P09493 RNU1-112P-201ENST00000364401 164 ntBASIC2.79□□□□□ -1.96
TPM1P09493 RNU6-619P-201ENST00000365146 108 ntBASIC2.79□□□□□ -1.96
TPM1P09493 MIR16-1-201ENST00000385271 89 ntBASIC2.79□□□□□ -1.96
TPM1P09493 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
TPM1P09493 RNA5SP354-201ENST00000391247 136 ntBASIC2.79□□□□□ -1.96
TPM1P09493 UBA52P6-201ENST00000399822 382 ntBASIC2.79□□□□□ -1.96
TPM1P09493 AL356967.1-201ENST00000406305 431 ntBASIC2.79□□□□□ -1.96
TPM1P09493 AC080125.1-201ENST00000414888 684 ntBASIC2.79□□□□□ -1.96
TPM1P09493 AC009414.1-201ENST00000427200 443 ntBASIC2.79□□□□□ -1.96
TPM1P09493 RPL7L1P10-201ENST00000427790 463 ntBASIC2.79□□□□□ -1.96
TPM1P09493 Z82190.1-201ENST00000454534 490 ntBASIC2.79□□□□□ -1.96
TPM1P09493 AC104164.3-201ENST00000467363 1258 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms