Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HOXC4P09017 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
HOXC4P09017 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HOXC4P09017 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXC4P09017 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HOXC4P09017 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXC4P09017 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXC4P09017 RNU4-51P-201ENST00000364206 140 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 SNORA9.2-201ENST00000365361 133 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 SNORD116.1-201ENST00000365628 92 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 RNU6-629P-201ENST00000384061 103 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 RNU6-339P-201ENST00000384310 107 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 MTCO1P56-201ENST00000401674 224 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
HOXC4P09017 RPL23AP47-201ENST00000408017 460 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 AL008987.1-201ENST00000415528 237 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 AC027644.1-201ENST00000419595 298 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 RPL7P46-201ENST00000425129 740 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 AL009174.1-201ENST00000426577 416 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 RAC1P8-201ENST00000427086 527 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 AL590103.1-201ENST00000434488 307 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 SETP8-201ENST00000435341 628 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 EEF1A1P39-201ENST00000440791 250 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.91□□□□□ -1.94
HOXC4P09017 MTCYBP42-201ENST00000444653 1130 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 AP001486.1-201ENST00000463339 476 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 AC004263.1-201ENST00000479327 332 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 AL049873.1-201ENST00000480540 376 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXC4P09017 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXC4P09017 KCTD9P5-201ENST00000504141 1170 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXC4P09017 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXC4P09017 AC119751.1-201ENST00000513357 765 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 RN7SKP282-201ENST00000516824 299 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 SNORA31.26-201ENST00000517250 137 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.91□□□□□ -1.94
HOXC4P09017 AC007536.1-201ENST00000533382 349 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.91□□□□□ -1.94
HOXC4P09017 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXC4P09017 AC009094.1-201ENST00000564443 426 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXC4P09017 AC008088.1-201ENST00000580993 280 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXC4P09017 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXC4P09017 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXC4P09017 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.91□□□□□ -1.94
HOXC4P09017 HSPE1P14-201ENST00000605812 302 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 AC024257.5-201ENST00000612739 531 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.91□□□□□ -1.94
HOXC4P09017 AL137790.1-201ENST00000634283 177 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 AC090897.3-201ENST00000636973 1157 ntBASIC2.91□□□□□ -1.94
HOXC4P09017 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXC4P09017 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HOXC4P09017 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
HOXC4P09017 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXC4P09017 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
HOXC4P09017 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HOXC4P09017 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.9□□□□□ -1.94
HOXC4P09017 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.9□□□□□ -1.94
HOXC4P09017 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.9□□□□□ -1.94
HOXC4P09017 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
HOXC4P09017 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXC4P09017 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HOXC4P09017 ANKRD36P1-201ENST00000344424 659 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 RNU6-1214P-201ENST00000363650 109 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 SNORD116-2-201ENST00000384274 95 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 SNORD116-6-201ENST00000384711 96 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC4P09017 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC4P09017 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC4P09017 AC084290.1-201ENST00000434995 374 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXC4P09017 AL831737.1-201ENST00000441288 271 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 FGF7P5-201ENST00000441829 291 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC4P09017 PTENP1-201ENST00000447117 1215 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 AC093392.2-201ENST00000450682 337 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXC4P09017 CDC42P1-201ENST00000456658 548 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC4P09017 AC010285.1-201ENST00000470580 392 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 RPS29P26-201ENST00000477483 171 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 AC012181.1-201ENST00000479895 423 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 OR5H5P-201ENST00000503164 928 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HOXC4P09017 AC091860.1-201ENST00000505723 432 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC4P09017 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXC4P09017 SCGB1D5P-201ENST00000515134 247 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 PRELID3BP4-201ENST00000515476 571 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC4P09017 DEFB130C-202ENST00000530001 230 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC4P09017 OSBPL9P5-201ENST00000542581 171 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC4P09017 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC4P09017 AL157394.1-201ENST00000562983 1224 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 MTCO1P40-201ENST00000574371 625 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 ELOCP29-201ENST00000588193 334 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms