Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 ISCA1P3-201ENST00000577104 373 ntBASIC2.19□□□□□ -2.06
COL4A1P02462 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.19□□□□□ -2.06
COL4A1P02462 AC119674.1-220ENST00000641502 1048 ntBASIC2.19□□□□□ -2.06
COL4A1P02462 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL4A1P02462 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.19□□□□□ -2.06
COL4A1P02462 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL4A1P02462 RNU2-37P-201ENST00000410695 177 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A1P02462 RPL31P20-201ENST00000449593 360 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.18□□□□□ -2.06
COL4A1P02462 AC109486.1-201ENST00000486833 374 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 NAMPTP2-201ENST00000505629 1115 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A1P02462 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A1P02462 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A1P02462 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A1P02462 MIR4716-201ENST00000579628 84 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A1P02462 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A1P02462 AC010200.2-201ENST00000605098 235 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 KATNBL1P1-201ENST00000605192 748 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 AC019131.2-201ENST00000609071 870 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 AC010678.1-201ENST00000614118 713 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A1P02462 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A1P02462 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
COL4A1P02462 BTF3P4-201ENST00000418852 495 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 MTCYBP7-201ENST00000419540 1134 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A1P02462 TRIAP1P1-201ENST00000427062 225 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 MTCO1P57-201ENST00000432182 261 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.18□□□□□ -2.06
COL4A1P02462 TPTE2P1-204ENST00000435256 593 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 RPL23AP76-201ENST00000441860 458 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 HAUS1P1-201ENST00000505275 832 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 RNU6-551P-201ENST00000516661 103 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.18□□□□□ -2.06
COL4A1P02462 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.18□□□□□ -2.06
COL4A1P02462 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A1P02462 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A1P02462 ZNF192P1-203ENST00000565888 810 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 AC006270.2-201ENST00000578523 652 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A1P02462 VN1R74P-201ENST00000613259 503 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A1P02462 AC012321.1-201ENST00000561622 1588 ntBASIC2.18□□□□□ -2.06
COL4A1P02462 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A1P02462 RNU6-891P-201ENST00000384280 111 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 SNORA26.7-201ENST00000391288 122 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A1P02462 AP1B1P2-201ENST00000416196 106 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 RPL7P46-201ENST00000425129 740 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 AC022022.1-201ENST00000430304 178 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.17□□□□□ -2.06
COL4A1P02462 ELOCP13-201ENST00000443934 329 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 AC069277.2-201ENST00000454211 432 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.17□□□□□ -2.06
COL4A1P02462 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.17□□□□□ -2.06
COL4A1P02462 LARP7P4-201ENST00000481075 878 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 AC006483.1-201ENST00000487308 313 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.17□□□□□ -2.06
COL4A1P02462 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.17□□□□□ -2.06
COL4A1P02462 RNU6-491P-201ENST00000516099 110 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.17□□□□□ -2.06
COL4A1P02462 AC022790.1-201ENST00000522872 204 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 AP004242.1-201ENST00000533701 349 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.17□□□□□ -2.06
COL4A1P02462 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.17□□□□□ -2.06
COL4A1P02462 AL359821.1-201ENST00000605519 182 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.17□□□□□ -2.06
COL4A1P02462 AC005021.1-201ENST00000608730 355 ntBASIC2.17□□□□□ -2.06
COL4A1P02462 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A1P02462 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A1P02462 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A1P02462 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL4A1P02462 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.16□□□□□ -2.06
COL4A1P02462 AL590762.3-201ENST00000436372 640 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 XKRY2-201ENST00000442362 1093 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AC011753.1-201ENST00000451001 220 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 CDC42P1-201ENST00000456658 548 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AC104564.1-201ENST00000493028 407 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
COL4A1P02462 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.16□□□□□ -2.06
COL4A1P02462 FABP5P6-201ENST00000510588 409 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.16□□□□□ -2.06
COL4A1P02462 MTCO1P30-201ENST00000515244 580 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 OR4P1P-201ENST00000530808 1136 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.16□□□□□ -2.06
COL4A1P02462 AL670379.6-201ENST00000603753 252 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AL670379.11-201ENST00000604059 253 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AL670379.10-201ENST00000604330 253 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AC008162.1-201ENST00000604718 254 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AL670379.1-201ENST00000604752 252 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AL670379.2-201ENST00000604983 252 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AL670379.5-201ENST00000605253 252 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AL670379.4-201ENST00000605279 254 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AL670379.12-201ENST00000605291 253 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AL670379.8-201ENST00000605353 252 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms