Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RNU6-875P-201ENST00000516488 106 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.14□□□□□ -1.75
TOP3BO95985 AC063950.1-201ENST00000552036 308 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.14□□□□□ -1.75
TOP3BO95985 ANP32BP3-201ENST00000559213 706 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 AC106782.4-201ENST00000568264 210 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 AC090616.5-202ENST00000582111 297 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 AC112187.2-201ENST00000604345 283 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 AC112191.3-201ENST00000604371 277 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 AL049634.3-201ENST00000604968 457 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 AC008536.2-201ENST00000607284 349 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 AL121757.2-201ENST00000611223 313 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 AC068722.2-201ENST00000618734 544 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 MIR6500-201ENST00000622700 86 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TOP3BO95985 LINC02471-203ENST00000641941 4752 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 AC018555.1-201ENST00000567548 1980 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 AL592437.2-201ENST00000421655 2434 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.14□□□□□ -1.75
TOP3BO95985 MTND5P28-201ENST00000438005 1594 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TOP3BO95985 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TOP3BO95985 AC073346.2-201ENST00000624724 2058 ntBASIC4.14□□□□□ -1.75
TOP3BO95985 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TOP3BO95985 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TOP3BO95985 SAGE2P-201ENST00000420011 2126 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.13□□□□□ -1.75
TOP3BO95985 RNA5SP502-201ENST00000362694 119 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 RNU1-14P-201ENST00000362759 152 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 RNU6-780P-201ENST00000391030 104 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 ENSAP1-201ENST00000392855 326 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 RPS3AP36-201ENST00000398190 775 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 GSTA9P-201ENST00000406231 611 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AL023807.1-201ENST00000407932 359 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 MIR1179-201ENST00000408703 91 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 RPS3AP3-201ENST00000411933 242 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.13□□□□□ -1.75
TOP3BO95985 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.13□□□□□ -1.75
TOP3BO95985 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TOP3BO95985 MTCO2P11-201ENST00000431069 680 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.13□□□□□ -1.75
TOP3BO95985 AL451074.3-201ENST00000437709 472 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 PGBD4P3-201ENST00000440731 581 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 RPS4XP4-201ENST00000443195 763 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.13□□□□□ -1.75
TOP3BO95985 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.13□□□□□ -1.75
TOP3BO95985 RAD23BP3-201ENST00000454157 1152 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 RPL23AP81-201ENST00000455252 467 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 snoU13.7-201ENST00000459220 104 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AC005726.1-201ENST00000494679 427 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 RPL31P61-201ENST00000496160 376 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.13□□□□□ -1.75
TOP3BO95985 AC114981.1-201ENST00000503897 678 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AC009646.1-201ENST00000510455 318 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 KCTD9P2-201ENST00000512203 1013 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.13□□□□□ -1.75
TOP3BO95985 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.13□□□□□ -1.75
TOP3BO95985 AC099522.1-202ENST00000514718 367 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 MTND5P4-201ENST00000514978 288 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 RNU6-150P-201ENST00000516237 95 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 RNU6-358P-201ENST00000516564 75 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.13□□□□□ -1.75
TOP3BO95985 AP001893.2-201ENST00000526949 202 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 ZNF705CP-201ENST00000530515 889 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AC022878.1-201ENST00000530684 149 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.13□□□□□ -1.75
TOP3BO95985 AK6P1-201ENST00000540219 478 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AC008127.2-201ENST00000549925 1075 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.13□□□□□ -1.75
TOP3BO95985 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.13□□□□□ -1.75
TOP3BO95985 MIR4637-201ENST00000582405 84 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.13□□□□□ -1.75
TOP3BO95985 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.13□□□□□ -1.75
TOP3BO95985 AL590282.1-201ENST00000610379 1136 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AC078899.5-201ENST00000612475 178 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 AL391261.4-201ENST00000616012 481 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 RPS4XP5-202ENST00000449995 1334 ntBASIC4.13□□□□□ -1.75
TOP3BO95985 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TOP3BO95985 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TOP3BO95985 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TOP3BO95985 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TOP3BO95985 OR4G11P-202ENST00000642116 1414 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TOP3BO95985 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
TOP3BO95985 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TOP3BO95985 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TOP3BO95985 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TOP3BO95985 RNU6-1090P-201ENST00000364065 94 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.12□□□□□ -1.75
TOP3BO95985 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
TOP3BO95985 MIR34B-201ENST00000385076 84 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.12□□□□□ -1.75
TOP3BO95985 AL603766.1-201ENST00000407763 664 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 SNORA3C-201ENST00000408792 125 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 RNU4-6P-201ENST00000410804 122 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 JKAMPP1-201ENST00000413804 919 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 AC108032.1-201ENST00000416706 207 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 RPS3AP9-201ENST00000417027 792 ntBASIC4.12□□□□□ -1.75
TOP3BO95985 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms