Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC098824.1-201ENST00000453565 980 ntBASIC3.42□□□□□ -1.86
PRKNO60260 AL033528.1-201ENST00000453780 140 ntBASIC3.42□□□□□ -1.86
PRKNO60260 SNRPFP4-201ENST00000456366 242 ntBASIC3.42□□□□□ -1.86
PRKNO60260 SNORD42A-201ENST00000459584 64 ntBASIC3.42□□□□□ -1.86
PRKNO60260 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRKNO60260 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRKNO60260 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRKNO60260 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.42□□□□□ -1.86
PRKNO60260 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.42□□□□□ -1.86
PRKNO60260 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRKNO60260 AC007424.1-203ENST00000554613 687 ntBASIC3.42□□□□□ -1.86
PRKNO60260 AC245505.1-201ENST00000556398 224 ntBASIC3.42□□□□□ -1.86
PRKNO60260 ZNF519P3-201ENST00000557158 1032 ntBASIC3.42□□□□□ -1.86
PRKNO60260 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.42□□□□□ -1.86
PRKNO60260 MIR4444-1-201ENST00000581696 74 ntBASIC3.42□□□□□ -1.86
PRKNO60260 MIR4444-2-201ENST00000584390 74 ntBASIC3.42□□□□□ -1.86
PRKNO60260 MIR3922-201ENST00000585192 84 ntBASIC3.42□□□□□ -1.86
PRKNO60260 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.42□□□□□ -1.86
PRKNO60260 NDUFA8P1-201ENST00000605525 367 ntBASIC3.42□□□□□ -1.86
PRKNO60260 AL021997.1-201ENST00000605757 193 ntBASIC3.42□□□□□ -1.86
PRKNO60260 RNA5SP108-201ENST00000605921 117 ntBASIC3.42□□□□□ -1.86
PRKNO60260 AL589743.7-201ENST00000612637 233 ntBASIC3.42□□□□□ -1.86
PRKNO60260 uc_338.32-201ENST00000615087 172 ntBASIC3.42□□□□□ -1.86
PRKNO60260 AC008250.2-201ENST00000615261 205 ntBASIC3.42□□□□□ -1.86
PRKNO60260 AL034408.1-202ENST00000636088 415 ntBASIC3.42□□□□□ -1.86
PRKNO60260 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.42□□□□□ -1.86
PRKNO60260 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PRKNO60260 AC007823.1-201ENST00000569932 1566 ntBASIC3.42□□□□□ -1.86
PRKNO60260 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PRKNO60260 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRKNO60260 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRKNO60260 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.41□□□□□ -1.86
PRKNO60260 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PRKNO60260 AC092447.7-201ENST00000422212 1621 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.41□□□□□ -1.86
PRKNO60260 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRKNO60260 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRKNO60260 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRKNO60260 CCT4P2-201ENST00000233836 1548 ntBASIC3.41□□□□□ -1.86
PRKNO60260 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PRKNO60260 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.41□□□□□ -1.86
PRKNO60260 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PRKNO60260 Y_RNA.41-201ENST00000362646 102 ntBASIC3.41□□□□□ -1.86
PRKNO60260 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.41□□□□□ -1.86
PRKNO60260 RNU6-1042P-201ENST00000384204 107 ntBASIC3.41□□□□□ -1.86
PRKNO60260 RNU6-339P-201ENST00000384310 107 ntBASIC3.41□□□□□ -1.86
PRKNO60260 RNU6-1215P-201ENST00000384441 102 ntBASIC3.41□□□□□ -1.86
PRKNO60260 SNORA70E-201ENST00000384492 135 ntBASIC3.41□□□□□ -1.86
PRKNO60260 MIR23B-201ENST00000384832 97 ntBASIC3.41□□□□□ -1.86
PRKNO60260 U3.29-201ENST00000391296 212 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AL356421.1-201ENST00000403255 413 ntBASIC3.41□□□□□ -1.86
PRKNO60260 HSPE1P8-201ENST00000406997 288 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AC127526.1-201ENST00000417526 366 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.41□□□□□ -1.86
PRKNO60260 CYP4F29P-201ENST00000420685 446 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.41□□□□□ -1.86
PRKNO60260 AC104651.1-201ENST00000427559 735 ntBASIC3.41□□□□□ -1.86
PRKNO60260 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.41□□□□□ -1.86
PRKNO60260 ATP5HP2-201ENST00000433885 485 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AC091862.1-201ENST00000438016 1100 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AC244505.5-201ENST00000443639 207 ntBASIC3.41□□□□□ -1.86
PRKNO60260 FAM103A2P-201ENST00000444122 354 ntBASIC3.41□□□□□ -1.86
PRKNO60260 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.41□□□□□ -1.86
PRKNO60260 MTCYBP1-201ENST00000454315 1119 ntBASIC3.41□□□□□ -1.86
PRKNO60260 RPS20P24-201ENST00000457473 361 ntBASIC3.41□□□□□ -1.86
PRKNO60260 RPS4XP10-201ENST00000465034 731 ntBASIC3.41□□□□□ -1.86
PRKNO60260 KLF3P2-201ENST00000465138 268 ntBASIC3.41□□□□□ -1.86
PRKNO60260 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.41□□□□□ -1.86
PRKNO60260 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.41□□□□□ -1.86
PRKNO60260 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.41□□□□□ -1.86
PRKNO60260 TXNP6-201ENST00000510190 310 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AC109464.2-201ENST00000510242 943 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.41□□□□□ -1.86
PRKNO60260 AC026403.1-201ENST00000518938 295 ntBASIC3.41□□□□□ -1.86
PRKNO60260 DUXAP2-201ENST00000519198 589 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.41□□□□□ -1.86
PRKNO60260 AC022878.1-201ENST00000530684 149 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AC006960.3-201ENST00000561845 705 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.41□□□□□ -1.86
PRKNO60260 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.41□□□□□ -1.86
PRKNO60260 AL353997.4-201ENST00000586196 166 ntBASIC3.41□□□□□ -1.86
PRKNO60260 BNIP3P33-201ENST00000598912 569 ntBASIC3.41□□□□□ -1.86
PRKNO60260 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.41□□□□□ -1.86
PRKNO60260 AC131902.3-201ENST00000611767 581 ntBASIC3.41□□□□□ -1.86
PRKNO60260 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PRKNO60260 AC018755.4-201ENST00000619715 454 ntBASIC3.41□□□□□ -1.86
PRKNO60260 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.41□□□□□ -1.86
PRKNO60260 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
PRKNO60260 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.41□□□□□ -1.86
PRKNO60260 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRKNO60260 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRKNO60260 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PRKNO60260 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PRKNO60260 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PRKNO60260 AC095050.2-201ENST00000510748 1458 ntBASIC3.41□□□□□ -1.86
PRKNO60260 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRKNO60260 AC027514.1-201ENST00000588561 1603 ntBASIC3.41□□□□□ -1.86
PRKNO60260 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.41□□□□□ -1.86
PRKNO60260 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PRKNO60260 PABPC1P7-201ENST00000413177 1513 ntBASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms