Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNA5SP367-201ENST00000516557 118 ntBASIC2.45□□□□□ -2.02
SGCEO43556 SNORA76.2-201ENST00000517095 137 ntBASIC2.45□□□□□ -2.02
SGCEO43556 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.45□□□□□ -2.02
SGCEO43556 HMGB1P14-201ENST00000557424 591 ntBASIC2.45□□□□□ -2.02
SGCEO43556 GTF2IP8-201ENST00000560687 584 ntBASIC2.45□□□□□ -2.02
SGCEO43556 SULT1C2P1-202ENST00000562418 459 ntBASIC2.45□□□□□ -2.02
SGCEO43556 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.45□□□□□ -2.02
SGCEO43556 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.45□□□□□ -2.02
SGCEO43556 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.45□□□□□ -2.02
SGCEO43556 AC093732.2-201ENST00000607950 274 ntBASIC2.45□□□□□ -2.02
SGCEO43556 AC097504.2-201ENST00000608088 454 ntBASIC2.45□□□□□ -2.02
SGCEO43556 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.45□□□□□ -2.02
SGCEO43556 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.45□□□□□ -2.02
SGCEO43556 AL356585.4-201ENST00000623078 1229 ntBASIC2.45□□□□□ -2.02
SGCEO43556 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.45□□□□□ -2.02
SGCEO43556 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.45□□□□□ -2.02
SGCEO43556 TAB3P1-202ENST00000452645 1634 ntBASIC2.45□□□□□ -2.02
SGCEO43556 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SGCEO43556 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SGCEO43556 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SGCEO43556 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.44□□□□□ -2.02
SGCEO43556 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SGCEO43556 DEFB108F-201ENST00000344638 222 ntBASIC2.44□□□□□ -2.02
SGCEO43556 Y_RNA.333-201ENST00000365274 102 ntBASIC2.44□□□□□ -2.02
SGCEO43556 MIR627-201ENST00000384979 97 ntBASIC2.44□□□□□ -2.02
SGCEO43556 RNU6-882P-201ENST00000391025 103 ntBASIC2.44□□□□□ -2.02
SGCEO43556 UBA52P6-201ENST00000399822 382 ntBASIC2.44□□□□□ -2.02
SGCEO43556 AL512633.1-201ENST00000399931 655 ntBASIC2.44□□□□□ -2.02
SGCEO43556 MTCO2P31-201ENST00000402702 684 ntBASIC2.44□□□□□ -2.02
SGCEO43556 AL139098.1-201ENST00000407291 389 ntBASIC2.44□□□□□ -2.02
SGCEO43556 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.44□□□□□ -2.02
SGCEO43556 RPL7P37-201ENST00000425095 738 ntBASIC2.44□□□□□ -2.02
SGCEO43556 AL139132.1-201ENST00000431587 344 ntBASIC2.44□□□□□ -2.02
SGCEO43556 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.44□□□□□ -2.02
SGCEO43556 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.44□□□□□ -2.02
SGCEO43556 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.44□□□□□ -2.02
SGCEO43556 AL691517.1-201ENST00000440833 1235 ntBASIC2.44□□□□□ -2.02
SGCEO43556 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.44□□□□□ -2.02
SGCEO43556 RPL32P14-201ENST00000463196 378 ntBASIC2.44□□□□□ -2.02
SGCEO43556 S100A11P2-201ENST00000467589 312 ntBASIC2.44□□□□□ -2.02
SGCEO43556 KC877373.1-201ENST00000479066 408 ntBASIC2.44□□□□□ -2.02
SGCEO43556 AC084024.2-201ENST00000503480 791 ntBASIC2.44□□□□□ -2.02
SGCEO43556 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.44□□□□□ -2.02
SGCEO43556 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SGCEO43556 AL359273.1-201ENST00000510918 627 ntBASIC2.44□□□□□ -2.02
SGCEO43556 AC109471.1-201ENST00000511631 612 ntBASIC2.44□□□□□ -2.02
SGCEO43556 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.44□□□□□ -2.02
SGCEO43556 AC091826.1-201ENST00000514065 313 ntBASIC2.44□□□□□ -2.02
SGCEO43556 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.44□□□□□ -2.02
SGCEO43556 SNORA31.21-201ENST00000517180 77 ntBASIC2.44□□□□□ -2.02
SGCEO43556 DEFB108D-201ENST00000527787 222 ntBASIC2.44□□□□□ -2.02
SGCEO43556 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.44□□□□□ -2.02
SGCEO43556 MIR3921-201ENST00000577308 85 ntBASIC2.44□□□□□ -2.02
SGCEO43556 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.44□□□□□ -2.02
SGCEO43556 AL161734.1-201ENST00000609720 557 ntBASIC2.44□□□□□ -2.02
SGCEO43556 AC104237.2-201ENST00000612456 443 ntBASIC2.44□□□□□ -2.02
SGCEO43556 CYP3A51P-201ENST00000633513 256 ntBASIC2.44□□□□□ -2.02
SGCEO43556 MAPK10-266ENST00000641066 6555 ntBASIC2.44□□□□□ -2.02
SGCEO43556 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SGCEO43556 DBF4P1-201ENST00000412976 1892 ntBASIC2.43□□□□□ -2.02
SGCEO43556 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SGCEO43556 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SGCEO43556 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SGCEO43556 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SGCEO43556 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SGCEO43556 DEFA7P-201ENST00000382676 285 ntBASIC2.43□□□□□ -2.02
SGCEO43556 MIR491-201ENST00000384877 84 ntBASIC2.43□□□□□ -2.02
SGCEO43556 SNORD65C-201ENST00000390962 71 ntBASIC2.43□□□□□ -2.02
SGCEO43556 MIR1290-201ENST00000408735 78 ntBASIC2.43□□□□□ -2.02
SGCEO43556 RNU2-15P-201ENST00000410692 191 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.43□□□□□ -2.02
SGCEO43556 SUMO1P4-201ENST00000429430 302 ntBASIC2.43□□□□□ -2.02
SGCEO43556 RNF2P1-201ENST00000442955 1010 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AC112653.1-201ENST00000443851 386 ntBASIC2.43□□□□□ -2.02
SGCEO43556 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AL050341.1-201ENST00000447743 313 ntBASIC2.43□□□□□ -2.02
SGCEO43556 RFC5P1-201ENST00000454419 874 ntBASIC2.43□□□□□ -2.02
SGCEO43556 Z82190.1-201ENST00000454534 490 ntBASIC2.43□□□□□ -2.02
SGCEO43556 CDC42P1-201ENST00000456658 548 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AC073901.1-201ENST00000462471 408 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.43□□□□□ -2.02
SGCEO43556 VN1R104P-201ENST00000505115 1009 ntBASIC2.43□□□□□ -2.02
SGCEO43556 RPL37P25-201ENST00000507308 276 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AC118282.2-201ENST00000508739 374 ntBASIC2.43□□□□□ -2.02
SGCEO43556 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.43□□□□□ -2.02
SGCEO43556 RPPH1-2P-201ENST00000516688 293 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AC068339.2-201ENST00000534395 618 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.43□□□□□ -2.02
SGCEO43556 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.43□□□□□ -2.02
SGCEO43556 AC093519.1-201ENST00000566109 298 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.43□□□□□ -2.02
SGCEO43556 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.43□□□□□ -2.02
SGCEO43556 AC013444.2-201ENST00000603317 787 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AL136363.1-201ENST00000605349 337 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AC024560.3-201ENST00000608482 349 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AC025588.4-201ENST00000615802 908 ntBASIC2.43□□□□□ -2.02
SGCEO43556 AL512506.2-201ENST00000624472 458 ntBASIC2.43□□□□□ -2.02
SGCEO43556 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SGCEO43556 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SGCEO43556 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms