Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.83□□□□□ -1.96
LSM1O15116 Z99129.2-201ENST00000619967 314 ntBASIC2.83□□□□□ -1.96
LSM1O15116 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.83□□□□□ -1.96
LSM1O15116 OR5BR1P-201ENST00000524992 1330 ntBASIC2.83□□□□□ -1.96
LSM1O15116 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.83□□□□□ -1.96
LSM1O15116 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LSM1O15116 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
LSM1O15116 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.82□□□□□ -1.96
LSM1O15116 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.82□□□□□ -1.96
LSM1O15116 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.82□□□□□ -1.96
LSM1O15116 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LSM1O15116 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LSM1O15116 RNU1-35P-201ENST00000362782 153 ntBASIC2.82□□□□□ -1.96
LSM1O15116 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.82□□□□□ -1.96
LSM1O15116 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
LSM1O15116 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LSM1O15116 MIR506-201ENST00000384998 124 ntBASIC2.82□□□□□ -1.96
LSM1O15116 AL035405.1-201ENST00000400795 710 ntBASIC2.82□□□□□ -1.96
LSM1O15116 RNU2-25P-201ENST00000411041 191 ntBASIC2.82□□□□□ -1.96
LSM1O15116 AL645937.1-202ENST00000421799 937 ntBASIC2.82□□□□□ -1.96
LSM1O15116 RPL27AP8-201ENST00000424277 446 ntBASIC2.82□□□□□ -1.96
LSM1O15116 AC234781.2-201ENST00000426370 994 ntBASIC2.82□□□□□ -1.96
LSM1O15116 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
LSM1O15116 AL162389.1-201ENST00000449233 177 ntBASIC2.82□□□□□ -1.96
LSM1O15116 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.82□□□□□ -1.96
LSM1O15116 AC103975.1-201ENST00000482506 483 ntBASIC2.82□□□□□ -1.96
LSM1O15116 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.82□□□□□ -1.96
LSM1O15116 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.82□□□□□ -1.96
LSM1O15116 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.82□□□□□ -1.96
LSM1O15116 OR5G4P-201ENST00000525251 760 ntBASIC2.82□□□□□ -1.96
LSM1O15116 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LSM1O15116 AC068339.2-201ENST00000534395 618 ntBASIC2.82□□□□□ -1.96
LSM1O15116 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.82□□□□□ -1.96
LSM1O15116 ELOCP31-201ENST00000540463 467 ntBASIC2.82□□□□□ -1.96
LSM1O15116 AC044913.1-201ENST00000557200 430 ntBASIC2.82□□□□□ -1.96
LSM1O15116 MIR4444-1-201ENST00000581696 74 ntBASIC2.82□□□□□ -1.96
LSM1O15116 MIR5194-201ENST00000582634 120 ntBASIC2.82□□□□□ -1.96
LSM1O15116 MIR4444-2-201ENST00000584390 74 ntBASIC2.82□□□□□ -1.96
LSM1O15116 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.82□□□□□ -1.96
LSM1O15116 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.82□□□□□ -1.96
LSM1O15116 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.82□□□□□ -1.96
LSM1O15116 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.82□□□□□ -1.96
LSM1O15116 AP000254.1-201ENST00000609934 520 ntBASIC2.82□□□□□ -1.96
LSM1O15116 AL020991.1-201ENST00000612314 373 ntBASIC2.82□□□□□ -1.96
LSM1O15116 AL162274.2-201ENST00000614406 332 ntBASIC2.82□□□□□ -1.96
LSM1O15116 AC140725.3-201ENST00000616193 880 ntBASIC2.82□□□□□ -1.96
LSM1O15116 AC084757.4-201ENST00000616350 526 ntBASIC2.82□□□□□ -1.96
LSM1O15116 AL157770.1-201ENST00000623049 439 ntBASIC2.82□□□□□ -1.96
LSM1O15116 OR4G11P-202ENST00000642116 1414 ntBASIC2.82□□□□□ -1.96
LSM1O15116 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
LSM1O15116 AC087359.1-201ENST00000508335 1740 ntBASIC2.82□□□□□ -1.96
LSM1O15116 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.81□□□□□ -1.96
LSM1O15116 AC080100.1-201ENST00000624239 5356 ntBASIC2.81□□□□□ -1.96
LSM1O15116 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LSM1O15116 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.81□□□□□ -1.96
LSM1O15116 RNU6-1180P-201ENST00000364935 107 ntBASIC2.81□□□□□ -1.96
LSM1O15116 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LSM1O15116 SNORA48.7-201ENST00000391302 135 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AL356057.2-201ENST00000403318 432 ntBASIC2.81□□□□□ -1.96
LSM1O15116 RNU2-47P-201ENST00000410649 186 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AL513477.1-202ENST00000417061 214 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AL158156.1-201ENST00000422509 473 ntBASIC2.81□□□□□ -1.96
LSM1O15116 TMEM167AP1-201ENST00000423409 219 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.81□□□□□ -1.96
LSM1O15116 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.81□□□□□ -1.96
LSM1O15116 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.81□□□□□ -1.96
LSM1O15116 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.81□□□□□ -1.96
LSM1O15116 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.81□□□□□ -1.96
LSM1O15116 RAC1P7-201ENST00000445367 377 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AC017099.1-201ENST00000448261 1028 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AC010099.1-201ENST00000455434 375 ntBASIC2.81□□□□□ -1.96
LSM1O15116 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
LSM1O15116 RN7SL807P-201ENST00000470923 297 ntBASIC2.81□□□□□ -1.96
LSM1O15116 RN7SL504P-201ENST00000494496 287 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.81□□□□□ -1.96
LSM1O15116 MTND2P31-201ENST00000512602 616 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.81□□□□□ -1.96
LSM1O15116 AC008885.1-201ENST00000514930 301 ntBASIC2.81□□□□□ -1.96
LSM1O15116 RNU5A-7P-201ENST00000515979 116 ntBASIC2.81□□□□□ -1.96
LSM1O15116 CASP1P1-201ENST00000526345 212 ntBASIC2.81□□□□□ -1.96
LSM1O15116 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.81□□□□□ -1.96
LSM1O15116 AC125611.1-201ENST00000549563 229 ntBASIC2.81□□□□□ -1.96
LSM1O15116 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.81□□□□□ -1.96
LSM1O15116 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.81□□□□□ -1.96
LSM1O15116 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.81□□□□□ -1.96
LSM1O15116 AC006504.3-201ENST00000586818 523 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AP001542.2-201ENST00000593141 364 ntBASIC2.81□□□□□ -1.96
LSM1O15116 BNIP3P24-201ENST00000593398 557 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AC015871.2-201ENST00000603605 948 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AL049779.4-201ENST00000604500 156 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AC090115.4-201ENST00000609970 188 ntBASIC2.81□□□□□ -1.96
LSM1O15116 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
LSM1O15116 AC010338.1-201ENST00000621823 717 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AC027309.3-201ENST00000623419 351 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AC010872.1-201ENST00000624225 675 ntBASIC2.81□□□□□ -1.96
LSM1O15116 AL356094.1-201ENST00000624663 1212 ntBASIC2.81□□□□□ -1.96
LSM1O15116 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.81□□□□□ -1.96
LSM1O15116 U6.101-201ENST00000637707 76 ntBASIC2.81□□□□□ -1.96
LSM1O15116 ASNSP3-201ENST00000451989 1306 ntBASIC2.81□□□□□ -1.96
LSM1O15116 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms