Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL137100.2-201ENST00000555786 315 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 AL035411.2-201ENST00000604022 421 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.5□□□□□ -2.17
COL6A5A8TX70 AC002076.2-201ENST00000617362 122 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 CYP3A51P-201ENST00000633513 256 ntBASIC1.5□□□□□ -2.17
COL6A5A8TX70 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
COL6A5A8TX70 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 RNA5SP139-201ENST00000364340 117 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 SNORA48.3-201ENST00000391081 134 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL6A5A8TX70 RPS29P12-201ENST00000460178 152 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 HMGB1P41-201ENST00000520234 440 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 AC098848.2-201ENST00000588023 330 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 AC007256.1-201ENST00000392253 2765 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL6A5A8TX70 AC006378.2-201ENST00000623178 2476 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 RNU6-1105P-201ENST00000384774 107 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 RNU6-1223P-201ENST00000517124 104 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 MIR5089-201ENST00000580047 84 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 AC068790.3-201ENST00000602988 553 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 AC009501.3-201ENST00000605001 1352 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL6A5A8TX70 RPL23AP61-201ENST00000623642 466 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 U6.98-201ENST00000637157 84 ntBASIC1.49□□□□□ -2.17
COL6A5A8TX70 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.49□□□□□ -2.17
COL6A5A8TX70 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL6A5A8TX70 XIAPP3-201ENST00000312918 795 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 RAD23BP2-201ENST00000416003 1207 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 AC234781.4-201ENST00000419384 244 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.48□□□□□ -2.17
COL6A5A8TX70 AC009474.2-201ENST00000451383 136 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 AC034244.1-201ENST00000507687 207 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 AC022634.1-201ENST00000520765 532 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.48□□□□□ -2.17
COL6A5A8TX70 MIR1273G-201ENST00000577677 100 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 AC017076.1-201ENST00000607613 578 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 AC243773.3-201ENST00000613270 256 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 AC022513.1-201ENST00000624512 117 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.48□□□□□ -2.17
COL6A5A8TX70 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.48□□□□□ -2.17
COL6A5A8TX70 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
COL6A5A8TX70 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
COL6A5A8TX70 Y_RNA.60-201ENST00000362831 98 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 AL356806.1-201ENST00000422524 916 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 DUXAP8-207ENST00000456786 622 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 RPL7P5-201ENST00000471472 736 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 VTA1P2-201ENST00000520205 911 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 OR4G1P-201ENST00000588632 938 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 AC005034.5-201ENST00000604219 466 ntBASIC1.48□□□□□ -2.17
COL6A5A8TX70 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
COL6A5A8TX70 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL6A5A8TX70 AP001486.2-201ENST00000561652 5113 ntBASIC1.47□□□□□ -2.17
COL6A5A8TX70 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 RPS27P27-201ENST00000498779 255 ntBASIC1.47□□□□□ -2.17
COL6A5A8TX70 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 SNORA25.15-201ENST00000516487 89 ntBASIC1.47□□□□□ -2.17
COL6A5A8TX70 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 AC090970.3-201ENST00000612566 866 ntBASIC1.47□□□□□ -2.17
COL6A5A8TX70 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 AC092881.1-201ENST00000638218 2733 ntBASIC1.47□□□□□ -2.17
COL6A5A8TX70 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
COL6A5A8TX70 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
COL6A5A8TX70 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL6A5A8TX70 PSPHP1-201ENST00000450062 261 ntBASIC1.47□□□□□ -2.17
COL6A5A8TX70 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 TMEM248P1-201ENST00000510579 951 ntBASIC1.47□□□□□ -2.17
COL6A5A8TX70 TTC39CP1-201ENST00000512513 755 ntBASIC1.47□□□□□ -2.17
COL6A5A8TX70 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 NIFKP8-201ENST00000560500 874 ntBASIC1.47□□□□□ -2.17
COL6A5A8TX70 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.47□□□□□ -2.17
COL6A5A8TX70 OR10AB1P-201ENST00000609613 938 ntBASIC1.47□□□□□ -2.17
COL6A5A8TX70 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL6A5A8TX70 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.46□□□□□ -2.18
COL6A5A8TX70 RNU6-105P-201ENST00000363909 104 ntBASIC1.46□□□□□ -2.18
COL6A5A8TX70 RPL7P53-201ENST00000421245 739 ntBASIC1.46□□□□□ -2.18
COL6A5A8TX70 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.46□□□□□ -2.18
COL6A5A8TX70 OR4P1P-201ENST00000530808 1136 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms