Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb3S4R1G7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.71□□□□□ -0.05
H2afb3S4R1G7 Gm21814-202ENSMUST00000203277 873 ntBASIC14.71□□□□□ -0.05
H2afb3S4R1G7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb3S4R1G7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb3S4R1G7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb3S4R1G7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
H2afb3S4R1G7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb3S4R1G7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb3S4R1G7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
H2afb3S4R1G7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.06
H2afb3S4R1G7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb3S4R1G7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb3S4R1G7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Mir5122-201ENSMUST00000175004 89 ntBASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb3S4R1G7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.67□□□□□ -0.06
H2afb3S4R1G7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms