Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfwd2Q9R1A8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfwd2Q9R1A8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Rfwd2Q9R1A8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfwd2Q9R1A8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfwd2Q9R1A8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Rfwd2Q9R1A8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfwd2Q9R1A8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Gm10812-201ENSMUST00000099864 546 ntBASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfwd2Q9R1A8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Gm715-201ENSMUST00000117865 831 ntBASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfwd2Q9R1A8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd2Q9R1A8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rfwd2Q9R1A8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd2Q9R1A8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms