Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm4Q9QXA5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Actl10-202ENSMUST00000226583 1501 ntBASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.91□□□□□ -0.34
Lsm4Q9QXA5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Gm12085-201ENSMUST00000119263 940 ntBASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Gm15378-201ENSMUST00000121894 207 ntBASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm4Q9QXA5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lsm4Q9QXA5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lsm4Q9QXA5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lsm4Q9QXA5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Gm37856-201ENSMUST00000191634 999 ntBASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm4Q9QXA5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms