Protein–RNA interactions for Protein: Q9ER99

Rsc1a1, Regulatory solute carrier protein family 1 member 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsc1a1Q9ER99 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Gm37025-201ENSMUST00000195159 829 ntBASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rsc1a1Q9ER99 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Gm42545-201ENSMUST00000202755 922 ntBASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rsc1a1Q9ER99 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Gm11249-201ENSMUST00000117071 859 ntBASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rsc1a1Q9ER99 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Gm37292-201ENSMUST00000192062 758 ntBASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rsc1a1Q9ER99 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rsc1a1Q9ER99 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rsc1a1Q9ER99 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms