Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Gm11950-201ENSMUST00000121615 838 ntBASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2aQ9DB34 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Gm29707-201ENSMUST00000196325 491 ntBASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chmp2aQ9DB34 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Gm33142-201ENSMUST00000193913 867 ntBASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2aQ9DB34 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Gm7367-201ENSMUST00000057611 492 ntBASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chmp2aQ9DB34 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2aQ9DB34 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.02■□□□□ 0.31
Chmp2aQ9DB34 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2aQ9DB34 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2aQ9DB34 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2aQ9DB34 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2aQ9DB34 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2aQ9DB34 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2aQ9DB34 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms