Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Gm7417-201ENSMUST00000192950 473 ntBASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.16□□□□□ -0.14
Mbd3l1Q9D9H3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd3l1Q9D9H3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Mbd3l1Q9D9H3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.15□□□□□ -0.15
Mbd3l1Q9D9H3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms