Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Gm18284-201ENSMUST00000172604 624 ntBASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps33aQ9D2N9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps33aQ9D2N9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Gm42642-201ENSMUST00000200683 355 ntBASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps33aQ9D2N9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Gm10033-202ENSMUST00000211874 928 ntBASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps33aQ9D2N9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.33■□□□□ 0.37
Vps33aQ9D2N9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps33aQ9D2N9 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.33■□□□□ 0.37
Vps33aQ9D2N9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps33aQ9D2N9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps33aQ9D2N9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps33aQ9D2N9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps33aQ9D2N9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps33aQ9D2N9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Gm8495-201ENSMUST00000188740 694 ntBASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms