Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf8Q99PV0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf8Q99PV0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf8Q99PV0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf8Q99PV0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf8Q99PV0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Prpf8Q99PV0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Gm13036-201ENSMUST00000117799 748 ntBASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Gm12497-201ENSMUST00000138778 237 ntBASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Mir5131-201ENSMUST00000175426 93 ntBASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf8Q99PV0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms