Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim11Q99PQ2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Gm15565-201ENSMUST00000118890 427 ntBASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim11Q99PQ2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.59■□□□□ 0.57
Trim11Q99PQ2 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim11Q99PQ2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim11Q99PQ2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim11Q99PQ2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim11Q99PQ2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim11Q99PQ2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trim11Q99PQ2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim11Q99PQ2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim11Q99PQ2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim11Q99PQ2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim11Q99PQ2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim11Q99PQ2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim11Q99PQ2 Gm10252-201ENSMUST00000209541 832 ntBASIC18.58■□□□□ 0.56
Trim11Q99PQ2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.58■□□□□ 0.56
Trim11Q99PQ2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trim11Q99PQ2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim11Q99PQ2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim11Q99PQ2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trim11Q99PQ2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.58■□□□□ 0.56
Trim11Q99PQ2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim11Q99PQ2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim11Q99PQ2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.58■□□□□ 0.56
Trim11Q99PQ2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim11Q99PQ2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim11Q99PQ2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim11Q99PQ2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms