Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Gm36967-201ENSMUST00000193814 266 ntBASIC19.19■□□□□ 0.66
Hdac9Q99N13 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac9Q99N13 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Gm25406-201ENSMUST00000157599 105 ntBASIC19.18■□□□□ 0.66
Hdac9Q99N13 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Hdac9Q99N13 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.18■□□□□ 0.66
Hdac9Q99N13 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac9Q99N13 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.17■□□□□ 0.66
Hdac9Q99N13 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Gm14494-201ENSMUST00000118786 435 ntBASIC19.17■□□□□ 0.66
Hdac9Q99N13 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Gm9727-201ENSMUST00000161387 555 ntBASIC19.17■□□□□ 0.66
Hdac9Q99N13 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Gm27628-201ENSMUST00000184911 107 ntBASIC19.17■□□□□ 0.66
Hdac9Q99N13 Gm43575-201ENSMUST00000196420 516 ntBASIC19.17■□□□□ 0.66
Hdac9Q99N13 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hdac9Q99N13 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.16■□□□□ 0.66
Hdac9Q99N13 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.16■□□□□ 0.66
Hdac9Q99N13 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac9Q99N13 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac9Q99N13 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Rarb-207ENSMUST00000225921 2756 ntBASIC19.15■□□□□ 0.66
Hdac9Q99N13 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac9Q99N13 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hdac9Q99N13 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.14■□□□□ 0.66
Hdac9Q99N13 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Hdac9Q99N13 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac9Q99N13 Gm24513-201ENSMUST00000174964 138 ntBASIC19.14■□□□□ 0.65
Hdac9Q99N13 Gm27397-201ENSMUST00000184997 107 ntBASIC19.14■□□□□ 0.65
Hdac9Q99N13 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.14■□□□□ 0.65
Hdac9Q99N13 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac9Q99N13 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.14■□□□□ 0.65
Hdac9Q99N13 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac9Q99N13 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms