Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.29□□□□□ -0.12
Scrt1Q99M85 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.29□□□□□ -0.12
Scrt1Q99M85 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm44357-201ENSMUST00000195897 142 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm19658-201ENSMUST00000196231 138 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm44367-201ENSMUST00000196836 138 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm44350-201ENSMUST00000197197 138 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm44390-201ENSMUST00000197533 144 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm44313-201ENSMUST00000198018 138 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm44486-201ENSMUST00000198508 138 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm44454-201ENSMUST00000198541 138 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm44314-201ENSMUST00000199263 138 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm44394-201ENSMUST00000199558 138 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm44484-201ENSMUST00000199873 138 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm44466-201ENSMUST00000200264 138 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm44359-201ENSMUST00000200671 138 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gm5364-201ENSMUST00000216789 889 ntBASIC14.28□□□□□ -0.12
Scrt1Q99M85 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scrt1Q99M85 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.27□□□□□ -0.12
Scrt1Q99M85 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scrt1Q99M85 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scrt1Q99M85 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scrt1Q99M85 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scrt1Q99M85 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Scrt1Q99M85 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scrt1Q99M85 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scrt1Q99M85 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.27□□□□□ -0.13
Scrt1Q99M85 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.27□□□□□ -0.13
Scrt1Q99M85 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Scrt1Q99M85 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scrt1Q99M85 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.26□□□□□ -0.13
Scrt1Q99M85 Gm27000-201ENSMUST00000182943 842 ntBASIC14.26□□□□□ -0.13
Scrt1Q99M85 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Gm2213-201ENSMUST00000197485 688 ntBASIC14.26□□□□□ -0.13
Scrt1Q99M85 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scrt1Q99M85 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scrt1Q99M85 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms