Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd3Q99LE3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Gm7153-201ENSMUST00000117092 455 ntBASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Lysmd3Q99LE3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Gm24589-201ENSMUST00000116692 94 ntBASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd3Q99LE3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lysmd3Q99LE3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lysmd3Q99LE3 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.89■□□□□ 0.3
Lysmd3Q99LE3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Rprl3-201ENSMUST00000157400 290 ntBASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd3Q99LE3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Gm36967-201ENSMUST00000193814 266 ntBASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Gm34391-201ENSMUST00000203706 907 ntBASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms