Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.24■□□□□ 0.67
Col20a1Q923P0 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.24■□□□□ 0.67
Col20a1Q923P0 Gm7506-201ENSMUST00000207758 815 ntBASIC19.24■□□□□ 0.67
Col20a1Q923P0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Col20a1Q923P0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.23■□□□□ 0.67
Col20a1Q923P0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.23■□□□□ 0.67
Col20a1Q923P0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Gm25406-201ENSMUST00000157599 105 ntBASIC19.23■□□□□ 0.67
Col20a1Q923P0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col20a1Q923P0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.22■□□□□ 0.67
Col20a1Q923P0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Mir6404-201ENSMUST00000183699 94 ntBASIC19.22■□□□□ 0.67
Col20a1Q923P0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Gm9172-201ENSMUST00000212092 954 ntBASIC19.22■□□□□ 0.67
Col20a1Q923P0 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.22■□□□□ 0.67
Col20a1Q923P0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col20a1Q923P0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Col20a1Q923P0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col20a1Q923P0 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.21■□□□□ 0.67
Col20a1Q923P0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col20a1Q923P0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col20a1Q923P0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col20a1Q923P0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col20a1Q923P0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col20a1Q923P0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col20a1Q923P0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col20a1Q923P0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.21■□□□□ 0.67
Col20a1Q923P0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col20a1Q923P0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col20a1Q923P0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col20a1Q923P0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.2■□□□□ 0.66
Col20a1Q923P0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.2■□□□□ 0.66
Col20a1Q923P0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col20a1Q923P0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col20a1Q923P0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms