Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha11Q91Y19 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.14■□□□□ 0.34
Pcdha11Q91Y19 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha11Q91Y19 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Gm13312-201ENSMUST00000119631 718 ntBASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha11Q91Y19 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdha11Q91Y19 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Rprl3-201ENSMUST00000157400 290 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms