Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha3Q91Y16 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha3Q91Y16 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha3Q91Y16 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha3Q91Y16 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha3Q91Y16 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha3Q91Y16 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha3Q91Y16 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha3Q91Y16 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha3Q91Y16 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Gm11950-201ENSMUST00000121615 838 ntBASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Gm6623-201ENSMUST00000173570 544 ntBASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Gm29518-201ENSMUST00000190858 372 ntBASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdha3Q91Y16 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Gm17808-201ENSMUST00000200859 894 ntBASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha3Q91Y16 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Mir770-201ENSMUST00000103252 94 ntBASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Gm14859-201ENSMUST00000117752 357 ntBASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Gm29707-201ENSMUST00000196325 491 ntBASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Pcdha3Q91Y16 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Gm44450-201ENSMUST00000199528 114 ntBASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha3Q91Y16 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms