Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Gm27742-201ENSMUST00000184667 60 ntBASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha9Q91Y11 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha9Q91Y11 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha9Q91Y11 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdha9Q91Y11 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Gm7284-201ENSMUST00000131667 944 ntBASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdha9Q91Y11 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Olfr129-201ENSMUST00000122318 993 ntBASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms