Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm30025-201ENSMUST00000218555 728 ntBASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Gm37055-201ENSMUST00000191866 133 ntBASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb4Q91XZ6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdhb4Q91XZ6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb4Q91XZ6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms