Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Mir770-201ENSMUST00000103252 94 ntBASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Gm28033-201ENSMUST00000184224 96 ntBASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Gm18669-201ENSMUST00000216049 778 ntBASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga9Q91XX9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhga9Q91XX9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhga9Q91XX9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pcdhga9Q91XX9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga9Q91XX9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms