Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgc3Q91XX1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgc3Q91XX1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhgc3Q91XX1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhgc3Q91XX1 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.46■□□□□ 0.06
Pcdhgc3Q91XX1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgc3Q91XX1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Gm12896-201ENSMUST00000118430 226 ntBASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Gm4974-201ENSMUST00000209974 875 ntBASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgc3Q91XX1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms