Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Gm10355-201ENSMUST00000097146 517 ntBASIC17.32■□□□□ 0.36
TraipQ8VIG6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
TraipQ8VIG6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TraipQ8VIG6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.31■□□□□ 0.36
TraipQ8VIG6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TraipQ8VIG6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.3■□□□□ 0.36
TraipQ8VIG6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Gm7506-201ENSMUST00000207758 815 ntBASIC17.3■□□□□ 0.36
TraipQ8VIG6 Gm10060-201ENSMUST00000212002 111 ntBASIC17.3■□□□□ 0.36
TraipQ8VIG6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Gm8655-201ENSMUST00000221159 852 ntBASIC17.3■□□□□ 0.36
TraipQ8VIG6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TraipQ8VIG6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Gm25990-201ENSMUST00000102440 86 ntBASIC17.29■□□□□ 0.36
TraipQ8VIG6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TraipQ8VIG6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TraipQ8VIG6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Gm4459-201ENSMUST00000118750 468 ntBASIC17.28■□□□□ 0.36
TraipQ8VIG6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.28■□□□□ 0.36
TraipQ8VIG6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Gm2651-201ENSMUST00000203560 838 ntBASIC17.28■□□□□ 0.36
TraipQ8VIG6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms