Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Gm27494-201ENSMUST00000184735 189 ntBASIC14□□□□□ -0.17
Cspg4Q8VHY0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cspg4Q8VHY0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Gm5682-201ENSMUST00000173402 505 ntBASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cspg4Q8VHY0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Gm8655-201ENSMUST00000221159 852 ntBASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cspg4Q8VHY0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cspg4Q8VHY0 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.96□□□□□ -0.18
Cspg4Q8VHY0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cspg4Q8VHY0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cspg4Q8VHY0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cspg4Q8VHY0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cspg4Q8VHY0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cspg4Q8VHY0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.96□□□□□ -0.18
Cspg4Q8VHY0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cspg4Q8VHY0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms