Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm11539-201ENSMUST00000119837 557 ntBASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Gm13436-201ENSMUST00000120418 567 ntBASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Gm13836-201ENSMUST00000121159 501 ntBASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf8Q8VC56 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Gm13474-201ENSMUST00000122466 815 ntBASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf8Q8VC56 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf8Q8VC56 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms