Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chrna3Q8R4G9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.01■□□□□ 0.15
Chrna3Q8R4G9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Chrna3Q8R4G9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chrna3Q8R4G9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16■□□□□ 0.15
Chrna3Q8R4G9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Chrna3Q8R4G9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Chrna3Q8R4G9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms