Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdt1Q8R4E9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdt1Q8R4E9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdt1Q8R4E9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdt1Q8R4E9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cdt1Q8R4E9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Cdt1Q8R4E9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.8■□□□□ 0.12
Cdt1Q8R4E9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Gm5864-201ENSMUST00000202263 970 ntBASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Dancr-204ENSMUST00000132389 2347 ntBASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdt1Q8R4E9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Gm37722-201ENSMUST00000193757 208 ntBASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Birc2-201ENSMUST00000054878 378 ntBASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdt1Q8R4E9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdt1Q8R4E9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdt1Q8R4E9 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.77■□□□□ 0.11
Cdt1Q8R4E9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdt1Q8R4E9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cdt1Q8R4E9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdt1Q8R4E9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdt1Q8R4E9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdt1Q8R4E9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdt1Q8R4E9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cdt1Q8R4E9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdt1Q8R4E9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.77■□□□□ 0.11
Cdt1Q8R4E9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.76■□□□□ 0.11
Cdt1Q8R4E9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdt1Q8R4E9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cdt1Q8R4E9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.76■□□□□ 0.11
Cdt1Q8R4E9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdt1Q8R4E9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdt1Q8R4E9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cdt1Q8R4E9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.76■□□□□ 0.11
Cdt1Q8R4E9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdt1Q8R4E9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdt1Q8R4E9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdt1Q8R4E9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdt1Q8R4E9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms